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Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
Protein Tyrosine Phosphatase SHP2 Controls Interleukin-8 Expression in Breast Cancer Cells
Romain J Amante1,2, Priska Auf der Maur1, Veronica Richina1
1Department of Biomedicine, University of Basel, University Hospital Basel, Basel, Switzerland.
Abstract:
Treatment of metastasis remains a clinical challenge and the majority of breast cancer-related deaths are the result of drug-resistant metastases. The protein tyrosine phosphatase SHP2 encoded by the proto-oncogene PTPN11 promotes breast cancer progression. Inhibition of SHP2 has been shown to decrease metastases formation in various breast cancer models, but specific downstream effectors of SHP2 remain poorly characterized. Certain cytokines in the metastatic cascade facilitate local invasion and promote metastatic colonization. In this study, we investigated cytokines affected by SHP2 that could be relevant for its pro-tumorigenic properties. We used a cytokine array to investigate differentially released cytokines in the supernatant of SHP2 inhibitor-treated breast cancer cells. Expression of CXCL8 transcripts and protein abundance were assessed in human breast cancer cell lines in which we blocked SHP2 using shRNA constructs or an allosteric inhibitor. The impact of SHP2 inhibition on the phospho-tyrosine-proteome and signaling was determined using mass spectrometry. From previously published RNAseq data (Aceto et al. in Nat. Med. 18:529-37, 2012), we computed transcription factor activities using an integrated system for motif activity response analysis (ISMARA) (Balwierz et al. in Genome Res. 24:869-84, 2014). Finally, using siRNA against ETS1, we investigated whether ETS1 directly influences CXCL8 expression levels. We found that IL-8 is one of the most downregulated cytokines in cell supernatants upon SHP2 blockade, with a twofold decrease in CXCL8 transcripts and a fourfold decrease in IL-8 protein. These effects were also observed in preclinical tumor models. Analysis of the phospho-tyrosine-proteome revealed that several effectors of the mitogen-activated protein kinase (MAPK) pathway are downregulated upon SHP2 inhibition in vitro. MEK1/2 inhibition consistently reduced IL-8 levels in breast cancer cell supernatants. Computational analysis of RNAseq data from SHP2-depleted tumors revealed reduced activity of the transcription factor ETS1, a direct target of ERK and a transcription factor reported to regulate IL-8 expression. Our work reveals that SHP2 mediates breast cancer progression by enhancing the production and secretion of the pro-metastatic cytokine IL-8. We also provide mechanistic insights into the effects of SHP2 inhibition and its downstream repercussions. Overall, these results support a rationale for targeting SHP2 in breast cancer.
Insights
Inhibition of SHP2 protein tyrosine phosphatase reduces interleukin-8 (IL-8) production, a key cytokine in breast cancer metastasis. This study reveals SHP2 as a driver of breast cancer progression by promoting IL-8 secretion, supporting SHP2 as a therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Metastasis is a major challenge in breast cancer treatment, often driven by drug-resistant metastatic cells.
- The protein tyrosine phosphatase SHP2 (encoded by PTPN11) promotes breast cancer progression and metastasis.
- Downstream effectors of SHP2 in metastasis remain poorly understood.
Purpose of the Study:
- To investigate cytokines affected by SHP2 that contribute to its pro-tumorigenic properties in breast cancer.
- To elucidate the downstream signaling pathways influenced by SHP2 inhibition.
- To explore the therapeutic potential of targeting SHP2 in breast cancer.
Main Methods:
- Cytokine array analysis of SHP2 inhibitor-treated breast cancer cells.
- Assessment of CXCL8 transcript and IL-8 protein levels after SHP2 inhibition (shRNA or allosteric inhibitor).
- Mass spectrometry to analyze phospho-tyrosine-proteome and signaling pathways.
- Computational analysis of RNAseq data using ISMARA for transcription factor activity.
- siRNA-mediated knockdown of ETS1 to assess its role in CXCL8 regulation.
Main Results:
- SHP2 inhibition significantly downregulated IL-8 (CXCL8 transcript and IL-8 protein) in breast cancer cells and preclinical models.
- SHP2 inhibition led to downregulation of mitogen-activated protein kinase (MAPK) pathway effectors.
- MEK1/2 inhibition reduced IL-8 levels, and ETS1 transcription factor activity was reduced upon SHP2 depletion.
- ETS1, an ERK target, was identified as a regulator of IL-8 expression.
Conclusions:
- SHP2 promotes breast cancer progression by enhancing the production and secretion of the pro-metastatic cytokine IL-8.
- SHP2 inhibition impacts IL-8 production via the MAPK pathway and transcription factor ETS1.
- Targeting SHP2 offers a promising therapeutic strategy for breast cancer, particularly for managing metastasis.
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