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Physics-constrained deep active learning for spatiotemporal modeling of cardiac electrodynamics.
1School of Industrial Engineering and Management, Oklahoma State University, Stillwater, OK, USA, 74078.
Computers in Biology and Medicine
|June 25, 2022
Summary
This study introduces a physics-constrained deep active learning (P-DAL) framework for modeling cardiac electrodynamics using sparse data. The P-DAL framework significantly improves predictive accuracy for heart electrical behavior in both healthy and diseased states.
Area of Science:
- Computational Biology
- Biomedical Engineering
- Machine Learning
Background:
- Electrophysiological models using partial differential equations (PDEs) solved by finite element method (FEM) lack clinical data integration.
- Sparse cardiac signal measurements from catheterization challenge traditional machine learning for predictive modeling.
- Existing methods struggle to incorporate real-world clinical data for accurate cardiac disease diagnosis and treatment.
Purpose of the Study:
- To develop a physics-constrained deep active learning (P-DAL) framework for modeling spatiotemporal cardiac electrodynamics.
- To integrate physical laws of cardiac electrical wave propagation with deep learning for robust prediction from sparse sensor data.
- To introduce a novel active learning strategy for optimizing data collection locations on the heart surface.
Main Methods:
- Adapted a physics-constrained deep learning (P-DL) framework to integrate cardiac electrophysiology PDEs with deep learning.
- Developed an active learning criterion combining P-DL prediction uncertainty and space-filling design for informative data acquisition.
- Evaluated the framework on healthy and diseased heart systems using sparse sensor measurements.
Main Results:
- The P-DL approach significantly outperformed traditional spatiotemporal Gaussian process (STGP) models, reducing relative error by up to 48.3% (healthy) and 28.0% (diseased).
- The proposed P-DAL framework demonstrated superior performance over P-DL with space-filling design (P-DSL) and random data sampling (P-DRL).
- P-DAL achieved relative error reductions of 16.3% and 28.0% (healthy) and 11.1% and 21.2% (diseased) compared to P-DSL and P-DRL, respectively.
Conclusions:
- The physics-constrained deep learning approach offers a robust method for modeling cardiac electrical behavior from sparse clinical data.
- The novel active learning strategy effectively identifies informative locations for data collection, enhancing predictive model accuracy.
- This P-DAL framework holds significant potential for improving cardiac disease diagnosis and treatment design through accurate computational modeling.
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