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Updated: Sep 5, 2025

Whole Mount Dissection and Immunofluorescence of the Adult Mouse Cochlea
Published on: January 1, 2016
Vestibular Organ Dissection and Whole-Mount Immunolabeling in Mouse
Timothy S Balmer1, Laurence O Trussell1
1Vollum Institute and Oregon Hearing Research Center, Oregon Health & Science University, Portland, USA.
Abstract:
The vestibular sensory apparatus contained in the inner ear is a marvelous evolutionary adaptation for sensing movement in 3 dimensions and is essential for an animal's sense of orientation in space, head movement, and balance. Damage to these systems through injury or disease can lead to vertigo, Meniere's disease, and other disorders that are profoundly debilitating. One challenge in studying vestibular organs is their location within the boney inner ear and their small size, especially in mice, which have become an advantageous mammalian model. This protocol describes the dissection procedure of the five vestibular organs from the inner ear of adult mice, followed by immunohistochemical labeling of a whole mount preparation using antibodies to label endogenous proteins such as calretinin to label Type I hair cells or to amplify genetically expressed fluorescent proteins for confocal microscopic imaging. Using typical lab equipment and reagents, a patient technician, student, or postdoc can learn to dissect and immunolabel mouse vestibular organs to investigate their structure in health and disease.
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