Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Marine Microbial Ecology01:30

Marine Microbial Ecology

Marine microbial ecosystems are shaped by distinct physicochemical limits, including high salinity, low nutrient availability, and fluctuating oxygen levels. These conditions favor smaller microbial cell sizes, which maximize their surface-to-volume ratio for efficient nutrient uptake.Microbial activity and community composition are closely linked to biogeochemical cycles, particularly in dynamic environments like estuaries, where halotolerant microbes thrive in response to variable salinity...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Amplified Arctic iceberg traffic reshapes benthic biodiversity.

Nature·2026
Same author

The Antarctic Seafloor Annotated Imagery Database.

Scientific data·2026
Same author

The Niebuhr net: A net for capturing benthopelagic fish and fauna with towed camera systems.

HardwareX·2026
Same author

The immeasurable value of plankton to humanity.

Bioscience·2025
Same author

A Lagrangian perspective reveals the carbon and oxygen budget of an oceanic eddy.

Communications earth & environment·2025
Same author

Monitoring benthic plumes, sediment redeposition and seafloor imprints caused by deep-sea polymetallic nodule mining.

Nature communications·2025
Same journal

Dataset of Optimized Structures of Aliphatic Chains Chemisorbed on Si(110) and Si(111) Surfaces via First-Principles Methods.

Scientific data·2026
Same journal

EURO-PROBE - Manual segmentations of the prostate and intraprostatic urethra on T2-weighted MRI.

Scientific data·2026
Same journal

Chromosome-Level Genome Assembly of Southern Africa Mozambique Tilapia (Oreochromis mossambicus) using PacBio HiFi and Omni-C sequencing.

Scientific data·2026
Same journal

Ovarian Stainology: Database of evidence-based immunohistochemical antigen expression in ovarian tumors.

Scientific data·2026
Same journal

A dataset of small protein conformational ensembles from all-atom molecular dynamics simulations.

Scientific data·2026
Same journal

A real-world Fitbit-derived dataset of activity, sleep, and heart rate with matched clinical factors in on-treatment lung cancer patients.

Scientific data·2026
See all related articles

Related Experiment Video

Updated: Jun 29, 2026

A Field Primer for Monitoring Benthic Ecosystems Using Structure-From-Motion Photogrammetry
06:36

A Field Primer for Monitoring Benthic Ecosystems Using Structure-From-Motion Photogrammetry

Published on: April 15, 2021

3.8K

Making marine image data FAIR.

Timm Schoening1, Jennifer M Durden2, Claas Faber3

  • 1GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany. tschoening@geomar.de.

Scientific Data
|July 15, 2022
PubMed
Summary
This summary is machine-generated.

Marine image data face management challenges due to heterogeneity. We propose image FAIR Digital Objects (iFDOs) to improve data findability, accessibility, interoperability, and reusability for ocean research.

More Related Videos

Reefshape: A System for the Efficient Collection and Automated Processing of Time-Series Underwater Photogrammetry Data for Benthic Habitat Monitoring
13:35

Reefshape: A System for the Efficient Collection and Automated Processing of Time-Series Underwater Photogrammetry Data for Benthic Habitat Monitoring

Published on: June 13, 2025

626
Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging
09:19

Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging

Published on: April 18, 2025

779

Related Experiment Videos

Last Updated: Jun 29, 2026

A Field Primer for Monitoring Benthic Ecosystems Using Structure-From-Motion Photogrammetry
06:36

A Field Primer for Monitoring Benthic Ecosystems Using Structure-From-Motion Photogrammetry

Published on: April 15, 2021

3.8K
Reefshape: A System for the Efficient Collection and Automated Processing of Time-Series Underwater Photogrammetry Data for Benthic Habitat Monitoring
13:35

Reefshape: A System for the Efficient Collection and Automated Processing of Time-Series Underwater Photogrammetry Data for Benthic Habitat Monitoring

Published on: June 13, 2025

626
Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging
09:19

Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging

Published on: April 18, 2025

779

Area of Science:

  • Marine biology
  • Oceanography
  • Data science

Background:

  • Underwater imagery generates large, heterogeneous datasets challenging traditional data management.
  • Lack of standardized formats hinders objective comparison and information extraction for marine research.
  • Need for sustainable image analysis, processing, and long-term data repositories.

Purpose of the Study:

  • To propose and demonstrate image FAIR Digital Objects (iFDOs) for marine image data.
  • To establish an infrastructure for creating, managing, and utilizing iFDOs.
  • To enhance the findability, accessibility, interoperability, and reusability (FAIR) of marine image data.

Main Methods:

  • Development of an infrastructure environment for iFDO creation and exploitation.
  • Implementation of procedures for iFDO validation, management, and storage.
  • Identification of essential associated data for marine imagery curation.

Main Results:

  • Demonstrated creation and validation of iFDOs for marine imagery.
  • Showcased management and storage solutions for iFDOs.
  • Defined critical metadata for curating marine image datasets.

Conclusions:

  • iFDOs offer a standardized framework for managing heterogeneous marine image data.
  • The proposed infrastructure reduces image management overheads.
  • Implementation of iFDOs increases visibility and promotes reuse of marine image data.