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Updated: Sep 4, 2025

Study of Protein-protein Interactions in Autophagy Research
Published on: September 9, 2017
Multiple functions of CALCOCO family proteins in selective autophagy
Wei Chen1, Xueqian Ouyang1, Linxi Chen1
1Hunan Provincial Key Laboratory of tumor microenvironment responsive drug research, Hunan Province Cooperative Innovation Center for Molecular Target New Drug Study, Institute of Pharmacy and Pharmacology, University of South China, Hengyang, Hunan, China.
Abstract:
Selective autophagy is the lysosomal degradation of specific intracellular components sequestered into autophagosomes, late endosomes, or lysosomes through the activity of selective autophagy receptors. CALCOCO family proteins are the newly found selective autophagy receptors, which include calcium binding and coiled-coil domain 1 (CALCOCO1), calcium binding and coiled-coil domain 2/nuclear domain 10 protein 52 (CALCOCO2/NDP52), and calcium binding and coiled-coil domain 3/Tax1-binding protein 1 (CALCOCO3/TAX1BP1). Specifically, CALCOCO1 can be recruited to endoplasmic reticulum (ER) and Golgi to mediate selective ER-phagy and Golgiphagy. CALCOCO2 and CALCOCO3, which are two essential cargo receptors, can mediate mitophagy and xenophagy through interacting with autophagy-related-8/microtubule-associated protein 1 light chain 3 (ATG8/LC3) on the growing autophagosome, and binding ubiquitin for cargo recruitment. Considering the significance of these proteins in selective autophagy, we review the structures, distribution, posttranslational modifications, and phylogenetic analysis of CALCOCO family proteins and their roles in different selective autophagy.
Insights
CALCOCO proteins are novel selective autophagy receptors. This review details their structures, functions, and roles in cellular degradation processes like ER-phagy and mitophagy.
Area of Science:
- Cell Biology
- Molecular Biology
- Autophagy Research
Background:
- Selective autophagy degrades specific cellular components via receptors.
- CALCOCO proteins (CALCOCO1, CALCOCO2/NDP52, CALCOCO3/TAX1BP1) are newly identified selective autophagy receptors.
- These receptors are crucial for targeting various cargos for lysosomal degradation.
Purpose of the Study:
- To review the structural, distributional, and post-translational characteristics of CALCOCO family proteins.
- To analyze the phylogenetic relationships among CALCOCO proteins.
- To elucidate the diverse roles of CALCOCO proteins in different selective autophagy pathways.
Main Methods:
- Literature review and analysis of existing research on CALCOCO proteins.
- Examination of protein structures, cellular localization data, and post-translational modifications.
- Phylogenetic analysis to understand evolutionary relationships.
- Review of functional studies implicating CALCOCO proteins in selective autophagy.
Main Results:
- CALCOCO1 mediates ER-phagy and Golgiphagy by interacting with ER and Golgi components.
- CALCOCO2 and CALCOCO3 act as cargo receptors for mitophagy and xenophagy.
- These receptors bind ubiquitin and interact with autophagy-related-8/microtubule-associated protein 1 light chain 3 (ATG8/LC3) for autophagosome formation.
Conclusions:
- CALCOCO proteins represent a significant class of selective autophagy receptors with distinct and overlapping functions.
- Understanding CALCOCO proteins is key to comprehending the regulation of selective autophagy.
- Further research into CALCOCO proteins could reveal new therapeutic targets for diseases involving protein aggregation or organelle dysfunction.
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