Genome sequence of the novel freshwater Microcystis cyanophage Mwe-Yong1112-1

Ruqian Cai1,2, Dengfeng Li3, Wei Lin1,4

  • 1School of Marine Sciences, Ningbo University, Ningbo, 315211, China.

Archives of Virology
|July 20, 2022
PubMed

Insights

A new freshwater cyanophage, Mwe-Yong1112-1, was identified with unique genomic and proteomic characteristics. This discovery expands our understanding of cyanophage diversity and evolution in aquatic environments.

Area of Science:

  • Microbiology
  • Virology
  • Aquatic Ecology

Background:

  • Cyanophages are viruses that infect cyanobacteria, playing crucial roles in aquatic ecosystems.
  • Understanding cyanophage diversity is essential for comprehending microbial dynamics and biogeochemical cycles.
  • The freshwater cyanophage Mwe-Yong1112-1 was isolated and characterized.

Purpose of the Study:

  • To isolate and characterize a novel freshwater cyanophage.
  • To determine the genomic and morphological features of the cyanophage.
  • To investigate the evolutionary placement of the cyanophage within the broader viral landscape.

Main Methods:

  • Isolation of cyanophage Mwe-Yong1112-1 using Microcystis wesenbergii as a host.
  • Morphological characterization via electron microscopy (head and tail dimensions).
  • Whole-genome sequencing and analysis (genome size, G+C content).
  • Comparative genomic analysis (Average Nucleotide Identity - ANI) and phylogenetic analysis (proteomic tree).

Main Results:

  • Cyanophage Mwe-Yong1112-1 possesses an icosahedral head (45 nm) and a flexible tail (133 nm x 4.5 nm).
  • The cyanophage genome is 39,679 bp with 66.6% G+C content.
  • Low ANI (67.7%) and sequence similarity (17.48%) indicate Mwe-Yong1112-1 is distinct at species and genus levels.
  • Proteomic analysis places Mwe-Yong1112-1 in a novel evolutionary lineage separate from known families.

Conclusions:

  • Mwe-Yong1112-1 represents a new evolutionary lineage of freshwater cyanophages.
  • The findings contribute valuable data to the study of cyanophage diversity.
  • This research enhances the knowledge base of viruses impacting cyanobacteria in freshwater ecosystems.

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