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Related Concept Videos

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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
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Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
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Exome/Genome-Wide Testing in Newborn Screening: A Proportionate Path Forward.

Vasiliki Rahimzadeh1, Jan M Friedman2, Guido de Wert3

  • 1Stanford Center for Biomedical Ethics, Stanford University, Stanford, CA, United States.

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|July 21, 2022
PubMed
Summary

Newborn screening (NBS) can be expanded to include more genetic diseases using exome or genome sequencing (ES/GS). However, rigorous evidence on clinical utility, cost, and accessibility is needed before widespread implementation.

Keywords:
accessexome sequencinggenome sequecingnewborn screeningpopulation health genomicspublic health ethics

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Area of Science:

  • Genetics
  • Public Health
  • Genomic Medicine

Background:

  • Population-based newborn screening (NBS) is a highly effective public health strategy for early detection of genetic disorders.
  • Advancements in exome/genome sequencing (ES/GS) technologies and decreased costs enable the potential expansion of NBS to include a wider range of rare genetic diseases.

Purpose of the Study:

  • To evaluate the feasibility and recommendations for expanding newborn screening programs using exome or genome sequencing.
  • To assess the scientific advances, limitations, and evidence requirements for integrating ES/GS into NBS.

Main Methods:

  • Review of recommendations from European and North American genetic societies.
  • Analysis of scientific literature on exome/genome sequencing in the context of newborn screening.
  • Application of the principle of proportionality and human right to benefit from science.

Main Results:

  • While ES/GS offers potential for expanded NBS, significant evidence is still required regarding clinical utility, variant interpretation, cost-effectiveness, and accessibility of follow-up care.
  • Confirmatory or second-tier testing using ES/GS may be suitable in specific circumstances as an adjunct to current NBS.

Conclusions:

  • Wider implementation of ES/GS in NBS necessitates robust evidence demonstrating clear benefits outweighing risks.
  • Further research and pilot studies are crucial to address programmatic barriers and facilitators for integrating ES/GS into newborn screening programs.