Related Experiment Video
Updated: Sep 2, 2025

10:17
An Allele-specific Gene Expression Assay to Test the Functional Basis of Genetic Associations
Published on: November 3, 2010
23.0K
Genotype-Phenotype Correlation Reanalysis in 83 Chinese Cases with OCRL Mutations
Lingxia Zhang1, Shugang Wang2, Ruoque Mao1
1Department of Nephrology, The Children's Hospital of Zhejiang University School of Medicine, Hangzhou, China.
Genetics Research
|August 3, 2022
Summary
Mutations in the OCRL gene cause Lowe syndrome and Dent-2 disease. This study found that mutation type and location correlate with disease phenotype, aiding in genetic counseling for OCRL-related disorders.
Area of Science:
- Genetics
- Molecular Biology
- Clinical Medicine
Background:
- Lowe syndrome and Dent-2 disease share genetic origins, stemming from variants in the OCRL gene.
- The precise reasons for distinct clinical presentations in patients with similar OCRL gene mutations remain unclear.
Purpose of the Study:
- To investigate the genotype-phenotype correlation in Chinese patients with Lowe syndrome and Dent-2 disease.
- To determine if mutation type and location within the OCRL gene influence disease manifestation.
Main Methods:
- A cohort of 83 Chinese children with hemizygous pathogenic or likely pathogenic OCRL variants was analyzed.
- Chi-square tests were used to assess the relationship between mutation characteristics (type and location) and clinical phenotypes.
Main Results:
- Truncating OCRL mutations were significantly more frequent in Lowe syndrome (70.8%) compared to Dent-2 disease (31.4%).
- Mutations associated with Dent-2 disease were predominantly in Exon 2-12 (60.0%), whereas Lowe syndrome mutations were mainly in Exon 13-23 (81.3%).
Conclusions:
- OCRL mutation type and location are significant indicators of phenotype in Lowe syndrome and Dent-2 disease.
- Findings can enhance the interpretation of novel OCRL variants and improve genetic counseling.
- Further international collaboration is recommended for comprehensive genotype-phenotype correlation analysis.
Related Concept Videos
Genetic Lingo
104.2K
Overview
104.2K
Single Nucleotide Polymorphisms-SNPs
15.7K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
15.7K
Pleiotropy
40.9K
Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...
40.9K
Conservative Site-specific Recombination and Phase Variation
6.1K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
6.1K
Epistasis Analysis
5.2K
Although Mendel chose seven unrelated traits in peas to study gene segregation, most traits involve multiple gene interactions that create a spectrum of phenotypes. When the interaction of various genes or alleles at different locations influences a phenotype, this is called epistasis. Epistasis often involves one gene masking or interfering with the expression of another (antagonistic epistasis). Epistasis often occurs when different genes are part of the same biochemical pathway. The...
5.2K

