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TimeTree 5: An Expanded Resource for Species Divergence Times
Sudhir Kumar1,2,3,4, Michael Suleski1, Jack M Craig1,2,3
1Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA.
The TimeTree of Life (TToL5) resource now includes evolutionary data for 137,306 species, significantly expanding our understanding of life's timeline. This accessible online tool aids researchers in exploring species divergence times and evolutionary history.
Area of Science:
- Evolutionary Biology
- Bioinformatics
- Computational Biology
Background:
- The TimeTree of Life project synthesizes molecular timetrees to provide accessible evolutionary knowledge.
- Previous editions have laid the groundwork for comprehensive evolutionary data compilation.
Purpose of the Study:
- To present the fifth edition of the TimeTree of Life resource (TToL5).
- To enhance accessibility and utility of evolutionary data for researchers and the public.
- To expand the scope and accuracy of species divergence time information.
Main Methods:
- Synthesis of published molecular timetrees.
- Development of a web portal for data retrieval and visualization.
- Implementation of an API for programmatic access to divergence times and timelines.
- Source code refactoring for ADA compliance and mobile-friendliness.
Main Results:
- TToL5 includes divergence time information for 137,306 species, a 41% increase from the previous edition.
- The TToL5 web interface is now ADA-compliant and mobile-friendly.
- Programmatic access to data is available via a new API.
Conclusions:
- TToL5 represents a significant advancement in making evolutionary knowledge accessible.
- The expanded dataset and improved interface facilitate broader research applications.
- The resource serves as a valuable tool for understanding the timeline of life.
Related Concept Videos
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