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Published on: July 20, 2022
Synaptosome microRNAs regulate synapse functions in Alzheimer's disease
Subodh Kumar1,2,3, Erika Orlov4, Prashanth Gowda4
1Center of Emphasis in Neuroscience, Department of Molecular and Translational Medicine, Texas Tech University Health Sciences Center, 5001 El Paso Drive, El Paso, TX, 79905, USA. subodh.kumar@ttuhsc.edu.
Abstract:
MicroRNAs (miRNAs) are found in nerve terminals, synaptic vesicles, and synaptosomes, but it is unclear whether synaptic and cytosolic miRNA populations differ in Alzheimer's disease (AD) or if synaptosomal miRNAs affect AD synapse activity. To address these questions, we generated synaptosomes and cytosolic fractions from postmortem brains of AD and unaffected control (UC) samples and analyzed them using a global Affymetrix miRNAs microarray platform. A group of miRNAs significantly differed (P < 0.0001) with high fold changes variance (+/- >200-fold) in their expressions in different comparisons: (1) UC synaptosome vs UC cytosol, (2) AD synaptosomes vs AD cytosol, (3) AD cytosol vs UC cytosol, and (4) AD synaptosomes vs UC synaptosomes. MiRNAs data analysis revealed that some potential miRNAs were consistently different across sample groups. These differentially expressed miRNAs were further validated using AD postmortem brains, brains of APP transgenic (Tg2576), Tau transgenic (P301L), and wild-type mice. The miR-501-3p, miR-502-3p, and miR-877-5p were identified as potential synaptosomal miRNAs upregulated with disease progression based on AD Braak stages. Gene Ontology Enrichment and Ingenuity Pathway Analysis of synaptosomal miRNAs showed the involvement of miRNAs in nervous system development, cell junction organization, synapse assembly formation, and function of GABAergic synapse. This is the first description of synaptic versus cytosolic miRNAs in AD and their significance in synapse function.
Insights
This study reveals distinct microRNA (miRNA) populations in Alzheimer's disease (AD) synapses, identifying specific miRNAs that change with disease progression and impact synapse function.
Area of Science:
- Neuroscience
- Molecular Biology
- Genetics
Background:
- MicroRNAs (miRNAs) are present in nerve terminals, but their specific roles in Alzheimer's disease (AD) synapses remain unclear.
- Investigating differences between synaptic and cytosolic miRNA populations in AD is crucial for understanding disease mechanisms.
Purpose of the Study:
- To determine if synaptic and cytosolic miRNA populations differ in Alzheimer's disease (AD).
- To investigate the impact of synaptosomal miRNAs on AD synapse activity.
- To identify specific miRNAs associated with AD progression and synapse function.
Main Methods:
- Analysis of synaptosomes and cytosolic fractions from postmortem brains of AD and unaffected control (UC) samples using miRNA microarrays.
- Validation of differentially expressed miRNAs in AD postmortem brains and transgenic mouse models (APP Tg2576, P301L Tau).
- Gene Ontology and Ingenuity Pathway Analysis to determine the functional roles of identified miRNAs.
Main Results:
- Significant differences in miRNA expression were observed between synaptosome and cytosol fractions, and between AD and UC samples.
- Specific miRNAs, including miR-501-3p, miR-502-3p, and miR-877-5p, were upregulated in synaptosomes with AD progression (Braak stages).
- Enrichment analysis indicated involvement of these miRNAs in nervous system development, synapse organization, and GABAergic synapse function.
Conclusions:
- This study provides the first description of distinct synaptic versus cytosolic miRNA populations in AD.
- Identified synaptosomal miRNAs are significantly altered in AD and associated with disease progression and synapse function.
- These findings highlight the potential of synaptosomal miRNAs as biomarkers and therapeutic targets for Alzheimer's disease.
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