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Updated: Sep 2, 2025

DNA Origami-Mediated Substrate Nanopatterning of Inorganic Structures for Sensing Applications
Published on: September 27, 2019
DNA Origami in the Quest for Membrane Piercing
Naresh Niranjan Dhanasekar1, Durairaj Thiyagarajan2, Dhiraj Bhatia3
1Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA.
DNA nanotechnology, specifically DNA origami, enables precise construction of nanopores for advanced single-molecule sensing and sequencing. This review explores DNA and RNA nanopore designs for enhanced biotechnological applications.
Area of Science:
- Biotechnology
- Nanotechnology
- Molecular Biology
Background:
- Nanopore-based technologies have expanded capabilities in label-free single-molecule sensing, nucleic acid sequencing (DNA, RNA, protein), and diagnostics.
- Diverse nanopore sources are utilized, including biological, solid-state, hybrid, and synthetic ion-like channels.
- DNA nanotechnology, particularly DNA origami, allows for the precise assembly of complex 3D nanostructures, including nanopores with controlled dimensions.
Purpose of the Study:
- To review the construction of nanopores using DNA nanotechnology for biosensing.
- To summarize DNA-based nanopore designs and their sensing properties.
- To explore RNA nanopores for peptide sensing applications.
Main Methods:
- Utilizing DNA nanotechnology, including DNA origami, to construct individual nanopores.
- Integrating DNA nanopores into lipid-based systems or solid-state devices and nanocapillaries.
- Investigating the design principles of DNA and RNA nanopores for sensing applications.
Main Results:
- DNA origami enables precise control over nanopore size and shape for enhanced biosensing.
- Hybrid architectures combining DNA nanopores with solid-state devices or nanocapillaries improve sensing functions.
- Various DNA-based nanopore designs exhibit distinct sensing properties.
Conclusions:
- DNA nanotechnology offers a versatile platform for creating custom nanopores for advanced single-molecule analysis.
- DNA and RNA nanopores hold significant potential for label-free biosensing and sequencing applications.
- Further development of these DNA-based nanostructures can drive innovation in biotechnology and diagnostics.
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