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SERPING1 Variants and C1-INH Biological Function: A Close Relationship With C1-INH-HAE
Christian Drouet1,2, Alberto López-Lera3, Arije Ghannam4
1Department of Infection, Immunity and Inflammation, Institut Cochin, INSERM UMR1016, Université de Paris, Paris, France.
Insights
Hereditary angioedema with C1 Inhibitor deficiency (C1-INH-HAE) is primarily caused by SERPING1 gene variants, with most identified as pathogenic. Understanding these genetic factors is crucial for diagnosing and managing this rare condition.
Area of Science:
- Genetics
- Molecular Biology
- Immunology
Background:
- Hereditary angioedema with C1 Inhibitor deficiency (C1-INH-HAE) is a rare genetic disorder.
- C1 Inhibitor (C1-INH) is crucial for regulating the kallikrein-kinin system (KKS) and controlling inflammation via complement and plasminogen pathways.
- Dysregulation of these systems due to C1-INH deficiency leads to recurrent swelling episodes.
Purpose of the Study:
- To analyze the spectrum and characteristics of SERPING1 gene variants in C1-INH-HAE patients.
- To understand the genetic basis and pathogenic mechanisms of C1-INH-HAE.
- To provide insights into genotype-phenotype correlations and diagnostic criteria.
Main Methods:
- Bioinformatic analysis of SERPING1 variants from a large cohort (n=809) and pedigrees (n=1,494).
- Classification of variants based on pathogenicity (pathogenic, likely pathogenic, benign, etc.).
- Analysis of variant types including deletions, duplications, missense, and splice site mutations.
- Investigation of de novo variants and gonadal mosaicism.
Main Results:
- SERPING1 variants account for 86.8% of HAE families, with a high mutational liability.
- Over 90% of reported SERPING1 variants are pathogenic or likely pathogenic.
- Common mechanisms include haploinsufficiency, dominant-negative effects, deletions/duplications (especially in exon 4), and splice site alterations.
- De novo variants represent 5.6% of cases; gonadal mosaicism is rare.
Conclusions:
- SERPING1 variants are the primary cause of C1-INH-HAE, exhibiting diverse mutation types.
- Haploinsufficiency and dominant-negative effects are key pathogenic mechanisms.
- Accurate genetic diagnosis requires correlating SERPING1 genotypes with clinical and biological findings, identifying potential serpinopathies.
Abstract:
Hereditary angioedema with C1 Inhibitor deficiency (C1-INH-HAE) is caused by a constellation of variants of the SERPING1 gene (n = 809; 1,494 pedigrees), accounting for 86.8% of HAE families, showing a pronounced mutagenic liability of SERPING1 and pertaining to 5.6% de novo variants. C1-INH is the major control serpin of the kallikrein-kinin system (KKS). In addition, C1-INH controls complement C1 and plasminogen activation, both systems contributing to inflammation. Recognizing the failed control of C1s protease or KKS provides the diagnosis of C1-INH-HAE. SERPING1 variants usually behave in an autosomal-dominant character with an incomplete penetrance and a low prevalence. A great majority of variants (809/893; 90.5%) that were introduced into online database have been considered as pathogenic/likely pathogenic. Haploinsufficiency is a common feature in C1-INH-HAE where a dominant-negative variant product impacts the wild-type allele and renders it inactive. Small (36.2%) and large (8.3%) deletions/duplications are common, with exon 4 as the most affected one. Point substitutions with missense variants (32.2%) are of interest for the serpin structure-function relationship. Canonical splice sites can be affected by variants within introns and exons also (14.3%). For noncanonical sequences, exon skipping has been confirmed by splicing analyses of patients' blood-derived RNAs (n = 25). Exonic variants (n = 6) can affect exon splicing. Rare deep-intron variants (n = 6), putatively acting as pseudo-exon activating mutations, have been characterized as pathogenic. Some variants have been characterized as benign/likely benign/of uncertain significance (n = 74). This category includes some homozygous (n = 10) or compound heterozygous variants (n = 11). They are presenting with minor allele frequency (MAF) below 0.00002 (i.e., lower than C1-INH-HAE frequency), and may be quantitatively unable to cause haploinsufficiency. Rare benign variants could contribute as disease modifiers. Gonadal mosaicism in C1-INH-HAE is rare and must be distinguished from a de novo variant. Situations with paternal or maternal disomy have been recorded (n = 3). Genotypes must be interpreted with biological investigation fitting with C1-INH expression and typing. Any SERPING1 variant reminiscent of the dysfunctional phenotype of serpin with multimerization or latency should be identified as serpinopathy.
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