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Leveraging CyVerse Resources for De Novo Comparative Transcriptomics of Underserved Non-model Organisms
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Genomic data is missing for many highly invasive species, restricting our preparedness for escalating incursion rates
Paige Matheson1, Angela McGaughran2
1Te Aka Mātuatua - School of Science, University of Waikato, Private Bag 3105, Hamilton, 3240, New Zealand.
Scientific Reports
|August 17, 2022
Summary
Population genomics offers powerful insights into invasive species, but research is limited. Most invasive species lack genomic resources, hindering our understanding and management of biological invasions.
Area of Science:
- Ecology
- Genomics
- Conservation Biology
Background:
- Biological invasions pose significant threats to biodiversity, human health, and economies.
- Population genomics provides advanced tools for understanding invasion success compared to traditional genetic methods.
Purpose of the Study:
- To assess the availability and utilization of population genomic resources for invasive species research.
- To identify gaps in genomic data for high-priority invasive species.
Main Methods:
- Analysis of the International Union for Conservation of Nature (IUCN) "100 Worst Invasive Alien Species" list.
- Review of existing population genetic and genomic studies for these species.
- Assessment of reference genome availability for listed species.
Main Results:
- 82% of listed invasive species have some population genetic data, but only 32% use population genomics.
- 55% of these species lack a reference genome, limiting genomic research.
- Invasion genomics is an emerging field with significant potential but is still in its early stages.
Conclusions:
- Despite the growing importance of invasion genomics, critical genomic resources like reference genomes are lacking for many invasive species.
- Further research utilizing population genomic data is essential for effective detection and management of biological invasions.
- There is a need to prioritize the development of genomic resources for invasive species research.
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