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Updated: Aug 27, 2025

Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
Both phosphorylation and phosphatase activity of PTEN are required to prevent replication fork progression during
Sandip Misra1, Sougata Ghosh Chowdhury2, Ginia Ghosh2
1PG Department of Microbiology, Bidhannagar College, EB-2 Sector-1, Saltlake, Kolkata, India.
Abstract:
PTEN is a tumor suppressor protein frequently altered in various cancers. PTEN-null cells have a characteristic of rapid proliferation with an unstable genome. Replication stress is one of the causes of the accumulation of genomic instability if not sensed by the cellular signaling. Though PTEN-null cells have shown to be impaired in replication progression and stalled fork recovery, the association between the catalytic function of PTEN regulated by posttranslational modulation and cellular response to replication stress has not been studied explicitly. To understand molecular mechanism, we find that PTEN-null cells display unrestrained replication fork progression with accumulation of damaged DNA after treatment with aphidicolin which can be rescued by ectopic expression of full-length PTEN, as evident from DNA fiber assay. Moreover, the C-terminal phosphorylation (Ser 380, Thr 382/383) of PTEN is essential for its chromatin association and sensing replication stress that, in response, induce cell cycle arrest. Further, we observed that PTEN induces HP1α expression and H3K9me3 foci formation in a C-terminal phosphorylation-dependent manner. However, phosphatase dead PTEN cannot sense replication stress though it can be associated with chromatin. Together, our results suggest that DNA replication perturbation by aphidicolin enables chromatin association of PTEN through C-terminal phosphorylation, induces heterochromatin formation by stabilizing and up-regulating H3K9me3 foci and augments CHK1 activation. Thereby, PTEN prevents DNA replication fork elongation and simultaneously causes G1-S phase cell cycle arrest to limit cell proliferation in stress conditions. Thus PTEN act as stress sensing protein during replication arrest to maintain genomic stability.
Insights
Phosphatase and tensin homolog (PTEN) acts as a crucial stress sensor during DNA replication. Its C-terminal phosphorylation enables chromatin binding, promoting cell cycle arrest and maintaining genomic stability in cancer cells.
Area of Science:
- Cancer Biology
- Molecular Oncology
- Genomic Stability
Background:
- PTEN is a tumor suppressor protein often altered in cancers, and PTEN-null cells exhibit rapid proliferation and genomic instability.
- Replication stress can lead to genomic instability if not properly sensed by cellular signaling pathways.
- The role of PTEN's catalytic function, modulated by posttranslational modifications, in responding to replication stress is not fully understood.
Purpose of the Study:
- To investigate the molecular mechanisms by which PTEN responds to replication stress.
- To elucidate the role of PTEN's posttranslational modifications, specifically C-terminal phosphorylation, in its function during replication stress.
- To understand how PTEN regulates cell cycle progression and genomic stability under replication stress conditions.
Main Methods:
- DNA fiber assays to assess replication fork progression.
- Ectopic expression of full-length and mutant PTEN.
- Analysis of PTEN's chromatin association and its effect on heterochromatin formation (H3K9me3 foci).
- Assessment of cell cycle arrest and CHK1 activation.
Main Results:
- PTEN-null cells show unrestrained replication fork progression and DNA damage accumulation upon aphidicolin treatment, which is rescued by PTEN re-expression.
- C-terminal phosphorylation of PTEN (Ser 380, Thr 382/383) is critical for its chromatin association and sensing of replication stress, leading to cell cycle arrest.
- Phosphatase-dead PTEN associates with chromatin but cannot sense replication stress.
- PTEN induces HP1α expression and H3K9me3 foci formation in a C-terminal phosphorylation-dependent manner, augmenting CHK1 activation.
Conclusions:
- PTEN acts as a stress-sensing protein during replication arrest, with its C-terminal phosphorylation mediating chromatin association and heterochromatin formation.
- PTEN prevents excessive DNA replication fork elongation and induces G1-S phase cell cycle arrest to maintain genomic stability.
- These findings highlight PTEN's critical role in preventing uncontrolled proliferation and maintaining genome integrity in cancer cells under stress.
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