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Updated: Aug 27, 2025

Subcutaneous Infection of Methicillin Resistant Staphylococcus Aureus MRSA
Published on: February 9, 2011
Case Report: Necrotizing fasciitis caused by Staphylococcus aureus positive for a new sequence variant of exfoliative
Artur J Sabat1, Marjan Wouthuyzen-Bakker1, Angelique Rondags2
1Department of Medical Microbiology and Infection Prevention, University Medical Center Groningen, University of Groningen, Groningen, Netherlands.
Abstract:
Objectives: Necrotizing fasciitis (NF) caused by S. aureus is a rare, aggressive and rapidly progressing superficial fascia infection with a high mortality rate. The aim of this study was to identify virulence-related genes from a complete genome sequence of a methicillin-susceptible S. aureus (MSSA) isolate recovered from a monomicrobial case of NF. Materials and methods: The MSSA isolate UMCG579 was cultured from a pus collection from the subcutis of a patient with NF. The genome of isolate UMCG579 was sequenced using MinION (Oxford Nanopore) and MiSeq (illumina) platforms. Results: The genome of the UMCG579 isolate was composed of a 2,741,379 bp chromosome and did not harbor any plasmids. Virulence factor profiling identified multiple pore-forming toxin genes in the UMCG579 chromosome, including the Panton-Valentine leukocidin (PVL) genes, and none of the superantigen genes. The UMCG579 isolate harbored a new sequence variant of the recently described ete gene encoding exfoliative toxin (type E). A search in the GenBank database revealed that the new sequence variant (ete2) was exclusively found among isolates (n = 115) belonging to MLST CC152. While the majority of S. aureus ete-positive isolates were recovered from animal sources, S. aureus ete2-positive isolates originated from human carriers and human infections. Comparative genome analysis revealed that the ete2 gene was located on a 8777 bp genomic island. Conclusion: The combination of two heterogeneously distributed potent toxins, ETE2 and PVL, is likely to enhance the pathogenic ability of S. aureus isolates. Since anti-virulence therapies for the treatment of S. aureus infections continue to be explored, the understanding of specific pathogenetic mechanisms may have an important prophylactic and therapeutic value. Nevertheless, the exact contribution of ETE sequence variants to S. aureus virulence in NF infections must be determined.
Insights
Necrotizing fasciitis (NF) is a severe infection caused by Staphylococcus aureus. This study identified novel virulence genes, including exfoliative toxin ETE2 and Panton-Valentine leukocidin (PVL), in an MSSA strain linked to NF, suggesting a role in pathogenesis.
Area of Science:
- Microbiology
- Genomics
- Infectious Diseases
Background:
- Necrotizing fasciitis (NF) caused by Staphylococcus aureus (S. aureus) is a rare but severe infection with high mortality.
- Identifying virulence factors is crucial for understanding S. aureus pathogenesis and developing targeted therapies.
Observation:
- A methicillin-susceptible S. aureus (MSSA) isolate (UMCG579) from a monomicrobial NF case was sequenced.
- The genome revealed genes for Panton-Valentine leukocidin (PVL) and a novel exfoliative toxin variant, ete2 (ETE2).
- The ete2 gene was found exclusively in MLST CC152 isolates, primarily from human sources, and located on a genomic island.
Findings:
- The MSSA UMCG579 genome lacks plasmids but contains genes for pore-forming toxins like PVL.
- A new exfoliative toxin variant, ete2, was identified and associated with human isolates of MLST CC152.
- Comparative genomics placed the ete2 gene on a specific genomic island.
Implications:
- The combination of ETE2 and PVL toxins may enhance S. aureus virulence in NF.
- Understanding these specific virulence mechanisms is vital for developing anti-virulence therapies.
- Further research is needed to determine the precise role of ETE variants in S. aureus-associated NF.
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