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Updated: Aug 25, 2025

In Silico Identification and Characterization of circRNAs During Host-Pathogen Interactions
Published on: October 21, 2022
Silencing mouse circular RNA circSlc8a1 by circular antisense cA-circSlc8a1 induces cardiac hepatopathy
Nan Wu1, Feiya Li1, Weining Yang1
1Sunnybrook Research Institute, Toronto, ON M4N3M5, Canada.
Insights
Researchers developed a novel circular antisense RNA to silence specific circular RNAs (circRNAs) in the heart. This method effectively silenced circSlc8a1, revealing its crucial role in maintaining heart function and potential for cardiovascular disease gene therapy.
Area of Science:
- Molecular Biology
- Cardiovascular Research
- RNA Biology
Background:
- Circular RNAs (circRNAs) are non-coding RNAs with critical roles in cardiovascular diseases.
- Studying circRNA function in vivo is challenging due to a lack of effective silencing methods.
- Gene editing often impacts parental coding genes, complicating circRNA-specific studies.
Purpose of the Study:
- To develop a method for specifically silencing circRNAs in vivo without affecting parental linear mRNAs.
- To investigate the functional role of circSlc8a1 in cardiac physiology and disease.
- To explore the therapeutic potential of circular antisense RNAs for cardiovascular diseases.
Main Methods:
- Development of a circular antisense RNA (cA-circSlc8a1) targeting circSlc8a1.
- Generation of transgenic mice expressing cA-circSlc8a1 for in vivo silencing.
- Generation of transgenic mice overexpressing circSlc8a1.
- Assessment of cardiac function and pathology in mouse models.
- Mitochondrial localization and ATP synthesis assays.
Main Results:
- Transgenic cA-circSlc8a1 mice exhibited congestive heart failure, characterized by increased body weight, edema, and hepatopathy.
- Overexpression of circSlc8a1 demonstrated a protective effect in a pressure overload-induced heart failure model.
- circSlc8a1 was found to translocate into mitochondria and promote ATP synthesis.
- The developed method successfully silenced circSlc8a1 without affecting the Slc8a1 linear mRNA.
Conclusions:
- circSlc8a1 plays an essential role in maintaining normal heart function.
- circSlc8a1's mitochondrial localization suggests a role in energy metabolism.
- Circular antisense RNA technology offers a specific approach for circRNA silencing in vivo.
- This study provides a foundation for developing circular antisense RNA-based gene therapies for cardiovascular diseases.
Abstract:
Circular RNAs (circRNAs) are a group of non-coding RNAs with a unique circular structure generated by back-splicing. It is acknowledged that circRNAs play critical roles in cardiovascular diseases. However, functional studies of circRNAs were impeded due to lack of effective in vivo silencing approaches. Since most circRNAs are produced by protein-coding transcripts, gene editing typically affects the coding activity of the parental genes. In this study, we developed a circular antisense RNA (cA-circSlc8a1) that could silence the highly expressed circRNA circSlc8a1 in the mouse heart but not its parental Slc8a1 linear mRNA. Transgenic cA-circSlc8a1 mice developed congestive heart failure resulting in a significant increase in the body weight secondary to peripheral edema and congestive hepatopathy. To further test the role of circSlc8a1, we generated transgenic mice overexpressing circSlc8a1 and observed a protective effect of circSlc8a1 in a pressure overload model. Mechanistically, we found that circSlc8a1 translocated into mitochondria to drive ATP synthesis. While establishing a transgenic murine model for antisense-mediated circRNA silencing without interfering with the parental linear RNA, our finding revealed the essential role of circSlc8a1 in maintaining heart function and may lay the groundwork of using the circular antisense RNA as a potential gene therapy approach for cardiovascular diseases.
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