An inducible amphipathic α-helix mediates subcellular targeting and membrane binding of RPE65

Sheetal Uppal1, Tingting Liu1, Emily Galvan1

  • 1Laboratory of Retinal Cell and Molecular Biology, National Eye Institute, National Institutes of Health, Bethesda, MD, USA.

Life Science Alliance
|October 20, 2022
PubMed

Insights

Retinal pigment epithelium protein 65 (RPE65) binds membranes via a newly identified amphipathic alpha-helix (AH). This AH, formed by residues 107-125, is crucial for RPE65 function in the visual cycle.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Vision Science

Background:

  • Retinal pigment epithelium protein 65 (RPE65) is essential for the visual cycle, facilitating retinol isomerization.
  • Membrane association is critical for RPE65 function, but the underlying mechanism remains unclear.
  • Specific residues (107-125) and palmitoylation at C112 are implicated in membrane interaction.

Purpose of the Study:

  • To elucidate the mechanism of membrane recognition and binding by RPE65.
  • To investigate the role of residues 107-125 and palmitoylation in RPE65 membrane association.
  • To establish a working model for RPE65-membrane interaction.

Main Methods:

  • Synthesis and analysis of peptides corresponding to RPE65 residues 107-125.
  • Circular dichroism spectroscopy to study peptide structure transitions.
  • Assays to determine palmitoylation levels, membrane association, and isomerization activity.
  • Molecular dynamic simulations of peptide-membrane interactions.

Main Results:

  • The RPE65 peptide (aa107-125) transitions from an unstructured loop to an amphipathic alpha-helix (AH) upon binding to membrane-mimicking surfaces.
  • This AH transition is spontaneous in the C112-palmitoylated peptide.
  • The AH structure significantly influences RPE65 palmitoylation, membrane binding, and enzymatic activity.
  • Molecular dynamics simulations confirmed AH insertion into the membrane.

Conclusions:

  • Residues 107-125 act as a membrane sensor, forming an AH that serves as a membrane-targeting motif for RPE65.
  • Cysteine palmitoylation at C112 plays a novel role in modulating RPE65's membrane interaction and function.
  • A new model for RPE65-membrane binding is proposed, highlighting the importance of the AH and palmitoylation.

Related Concept Videos

Tail-anchoring of Proteins in the ER Membrane01:45

Tail-anchoring of Proteins in the ER Membrane

Tail-anchored, or TA, proteins are estimated to make up to 3-5% of membrane proteins found in the eukaryotic cell. Such proteins have a single transmembrane domain located approximately 30 amino acid residues upstream from the C-terminal end. As a result, the signal recognition particle (SRP) cannot guide a TA protein to the ER membrane for cotranslational insertion. Hence, they are integrated into the ER membrane post-translationally using their C-terminal end as the anchor. TA proteins...
3.1K
Directing Proteins to the Rough Endoplasmic Reticulum01:34

Directing Proteins to the Rough Endoplasmic Reticulum

The organelle-specific signaling sequences direct proteins synthesized in the cytosol to their final destination like ER, mitochondria, peroxisomes, etc. Some of the proteins directed to ER are then trafficked via vesicles to other organelles within the cell or the extracellular environment through the Golgi complex. For example, the rough ER synthesizes soluble proteins for transportation to the lysosomes or secretion out of the cell. It can also synthesize transmembrane proteins that can...
7.4K
Insertion of Single-pass Transmembrane Proteins in the RER01:26

Insertion of Single-pass Transmembrane Proteins in the RER

Integral membrane proteins are proteins adhered to the lipid bilayer of a cell organelle or membrane. They can be of two types: transmembrane integral proteins that span the lipid bilayer and monotopic proteins that are attached to either side of the membrane but do not pass through it.
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
7.0K
Translocation of Proteins into the Mitochondria01:19

Translocation of Proteins into the Mitochondria

Mitochondrial precursors are translocated to the internal subcompartments via independent mechanisms involving distinct protein machineries called translocases.
Sorting of outer membrane proteins:
Mitochondrial outer membrane proteins are of two types: the transmembrane, beta-barrel porins, and the membrane-anchored, alpha-helical proteins. Beta-barrel porin precursors are translocated by the TOM complex and inserted into the outer mitochondrial membrane by the SAM complex. In contrast,...
3.2K
Mitochondrial Precursor Proteins01:39

Mitochondrial Precursor Proteins

Mitochondrial precursors are partially unfolded or loosely folded polypeptide chains. Newly synthesized precursors are inhibited from spontaneously folding into their native conformation by the cytosolic chaperones, heat shock proteins 70 (Hsp70), and mitochondrial import stimulation factors (MSFs). Precursors bound to MSFs are guided to the TOM70-TOM37 receptors, while precursors bound to Hsp70  chaperones are targetted to TOM20-TOM22 receptor complexes.
Most of the mitochondrial...
2.6K
Rab Proteins01:14

Rab Proteins

Rab proteins constitute the largest family of monomeric GTPases, of which 70 members are present in humans. Rab proteins and their effectors regulate consecutive stages of vesicle transport such as vesicle transport, docking, and fusion to the correct recipient membrane.
Rab proteins switch between a cytosolic, GDP-bound inactive state and a membrane-anchored, GTP-bound active state. By themselves, Rabs show slow rates of GDP/GTP exchange and GTP hydrolysis. Thus, Rab proteins are considered...
4.1K