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Establishing Cell Lines Overexpressing DR3 to Assess the Apoptotic Response to Anti-mitotic Therapeutics
Published on: January 11, 2019
Addressing the benefits of inhibiting APOBEC3-dependent mutagenesis in cancer
Mia Petljak1, Abby M Green2,3, John Maciejowski4
1Broad Institute of MIT and Harvard, Cambridge, MA, USA. mpetljak@broadinstitute.org.
Abstract:
Mutational signatures associated with apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like (APOBEC)3 cytosine deaminase activity have been found in over half of cancer types, including some therapy-resistant and metastatic tumors. Driver mutations can occur in APOBEC3-favored sequence contexts, suggesting that mutagenesis by APOBEC3 enzymes may drive cancer evolution. The APOBEC3-mediated signatures are often detected in subclonal branches of tumor phylogenies and are acquired in cancer cell lines over long periods of time, indicating that APOBEC3 mutagenesis can be ongoing in cancer. Collectively, these and other observations have led to the proposal that APOBEC3 mutagenesis represents a disease-modifying process that could be inhibited to limit tumor heterogeneity, metastasis and drug resistance. However, critical aspects of APOBEC3 biology in cancer and in healthy tissues have not been clearly defined, limiting well-grounded predictions regarding the benefits of inhibiting APOBEC3 mutagenesis in different settings in cancer. We discuss the relevant mechanistic gaps and strategies to address them to investigate whether inhibiting APOBEC3 mutagenesis may confer clinical benefits in cancer.
Insights
Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3 (APOBEC3) activity drives cancer evolution and resistance. Further research is needed to define APOBEC3
Area of Science:
- Cancer Biology
- Genetics
- Molecular Oncology
Background:
- Mutational signatures linked to apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3 (APOBEC3) cytosine deaminase activity are prevalent in numerous cancer types.
- These signatures are observed in therapy-resistant and metastatic tumors, suggesting APOBEC3's role in cancer progression and treatment failure.
Purpose of the Study:
- To investigate the role of APOBEC3 mutagenesis in driving cancer evolution, heterogeneity, metastasis, and drug resistance.
- To identify critical knowledge gaps in APOBEC3 biology within cancer and healthy tissues to inform potential therapeutic strategies.
Main Methods:
- Analysis of mutational signatures in various cancer types.
- Examination of APOBEC3-favored sequence contexts in driver mutations.
- Investigation of APOBEC3 signature distribution in tumor phylogenies and cancer cell lines.
Main Results:
- APOBEC3-mediated mutational signatures are found in over half of cancer types, often within subclonal branches and acquired over time.
- APOBEC3 mutagenesis is proposed as a disease-modifying process contributing to tumor heterogeneity, metastasis, and drug resistance.
Conclusions:
- APOBEC3 mutagenesis is an ongoing process that can drive cancer evolution and resistance.
- Defining APOBEC3's precise role and biological context is crucial for predicting the clinical benefits of its inhibition.
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