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Resting-State Functional MRI Adaptation with Attention Graph Convolution Network for Brain Disorder Identification.

Ying Chu1, Haonan Ren1, Lishan Qiao1

  • 1School of Mathematics Science, Liaocheng University, Liaocheng 252000, China.

Brain Sciences
|October 27, 2022
PubMed
Summary

This study introduces an attention graph convolutional network (A²GCN) to improve multi-site resting-state functional magnetic resonance imaging (rs-fMRI) analysis for brain disorders. The method effectively reduces data heterogeneity and enhances diagnostic accuracy for autism spectrum disorder.

Keywords:
autismdomain adaptationgraph convolutional networksmulti-site dataresting-state functional MRI

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Area of Science:

  • Neuroimaging
  • Machine Learning
  • Computational Neuroscience

Background:

  • Multi-site resting-state functional magnetic resonance imaging (rs-fMRI) data aids machine learning model training but suffers from significant site-specific data heterogeneity, hindering generalization.
  • Graph Convolutional Networks (GCNs) show promise for identifying fMRI biomarkers but often overlook the varying importance of different brain regions (ROIs) in disease diagnosis.

Purpose of the Study:

  • To develop a novel multi-site rs-fMRI adaptation framework, termed Attention GCN (A²GCN), for improved brain disorder identification.
  • To address data heterogeneity across imaging sites and enhance the interpretability of GCNs by incorporating ROI contributions.

Main Methods:

  • The A²GCN framework integrates three key components: GCN-based node representation learning for rs-fMRI features, a node attention mechanism to weigh ROI importance, and a domain adaptation module using mean absolute error and covariance constraints.
  • Domain adaptation techniques were employed to mitigate distribution differences between imaging sites.

Main Results:

  • The proposed A²GCN framework successfully reduced data heterogeneity across multiple imaging sites.
  • The method demonstrated improved performance in the automated recognition of autism spectrum disorders using fMRI data from the ABIDE database.
  • The attention mechanism enhanced the interpretability by identifying significant ROIs.

Conclusions:

  • The A²GCN framework offers a robust solution for analyzing multi-site rs-fMRI data, effectively handling data heterogeneity.
  • This approach improves the accuracy and interpretability of machine learning models for brain disorder identification, particularly for autism spectrum disorder.