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Updated: Aug 22, 2025

Oncogene Expression Analysis with Alterations in pH in a Pancreatic Ductal Cell Line
Published on: April 11, 2025
Does the LHPP gene share a common biological function in pancancer progression?
Kai Guo1, Wei Tian1, Hongtao Wang1
1Department of Thoracic Surgery, Shaanxi Provincial People's Hospital, Youyi Road 256, Xi'an, 710068, Shaanxi, China.
Abstract:
Although emerging evidence has revealed that LHPP, a histidine phosphatase protein, suppresses the progression of different cancers, a pan-cancer analysis still remains unavailable. Therefore, we first utilized different bioinformatics tools to explore the tumor inhibitory role of LHPP protein across 33 tumor types based on the TCGA project. Additionally, HGC-27 gastric cancer cells were used to evaluate the biological functions of LHPP after stable transfection with lentiviruses. Consequently, LHPP mRNA and protein expression were down-regulated in the most cancer tissues corresponding to normal tissues. The data showed that patients with higher LHPP performance had a better prognosis of overall survival (OS) and disease-free survival (DFS) in brain glioma and renal carcinoma. In addition, we found that enhancement of LHPP expression attenuated the proliferation, migration and invasion of gastric cancer cells. The expression levels of cell-cycle-related and EMT-related molecules, such as CDK4, CyclinD1, Vimentin and Snail, were clearly reduced. Moreover, a genetic alteration analysis showed that the most frequent mutation types in LHPP protein was amplification. The patients without LHPP mutation showed a better tendency of prognosis in UCEC, STAD and COAD. Cancer-associated fibroblast infiltration was also observed in head and neck squamous cell carcinoma, stomach adenocarcinoma and testicular germ cell tumors. In summary, our pancancer analysis among various tumor types could provide a comprehensive understanding of LHPP biological function in the progression of malignant diseases and promote the development of novel therapeutic targets.
Insights
The histidine phosphatase protein LHPP acts as a tumor suppressor across many cancers. Lower LHPP expression correlates with poorer patient survival, but its amplification may improve prognosis in specific cancers.
Area of Science:
- Oncology
- Molecular Biology
- Bioinformatics
Background:
- Emerging evidence suggests LHPP (histidine phosphatase) protein inhibits cancer progression.
- A comprehensive pan-cancer analysis of LHPP's role is currently unavailable.
Purpose of the Study:
- To investigate the tumor suppressive function of LHPP across 33 cancer types using bioinformatics.
- To evaluate the impact of LHPP expression on gastric cancer cell behavior and patient prognosis.
Main Methods:
- Utilized bioinformatics tools and The Cancer Genome Atlas (TCGA) project for pan-cancer analysis.
- Performed stable transfection of HGC-27 gastric cancer cells with lentiviruses to modulate LHPP expression.
- Analyzed LHPP mRNA and protein expression, overall survival (OS), disease-free survival (DFS), genetic alterations, and cancer-associated fibroblast infiltration.
Main Results:
- LHPP expression was downregulated in most cancer tissues compared to normal tissues.
- Higher LHPP expression correlated with better OS and DFS in brain glioma and renal carcinoma.
- Increased LHPP expression suppressed gastric cancer cell proliferation, migration, and invasion, reducing cell-cycle and EMT markers.
- LHPP amplification was the most frequent mutation; absence of LHPP mutation improved prognosis in UCEC, STAD, and COAD.
- Cancer-associated fibroblast infiltration was noted in specific cancers.
Conclusions:
- LHPP functions as a tumor suppressor across a wide range of cancers.
- LHPP expression levels and genetic alterations impact patient prognosis.
- LHPP represents a potential therapeutic target for various malignancies.
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