Identifying tumor antigens and immune subtypes of renal cell carcinoma for immunotherapy development

Xinglin Chen1, Tongtong Zhang1, Xinyu Zhai1

  • 1Urology Centre, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China.

Frontiers in Immunology
|November 21, 2022
PubMed

Insights

Researchers identified 13 immune-related genes and DBH-AS1 as potential targets for renal cell carcinoma (RCC) immunotherapy. These findings support the development of novel messenger ribonucleic acid (mRNA) vaccines for treating RCC.

Area of Science:

  • Oncology
  • Immunotherapy
  • Genomics

Background:

  • Renal cell carcinoma (RCC) remains a significant cause of cancer mortality.
  • Current cancer immunotherapy shows limited efficacy in RCC patients.
  • Messenger ribonucleic acid (mRNA) vaccines offer a promising therapeutic avenue.

Purpose of the Study:

  • To identify potential renal cell carcinoma (RCC) antigens for mRNA vaccine development.
  • To determine RCC immune subtypes and their clinical significance.
  • To explore novel immunotherapy targets for RCC.

Main Methods:

  • Utilized The Cancer Genome Atlas (TCGA) for gene expression and clinical data analysis.
  • Employed the Tumor Immune Estimation Resource (TIMER) to assess antigen-presenting cell infiltration.
  • Leveraged the Genomics of Drug Sensitivity in Cancer (GDSC) database for drug sensitivity analysis.
  • Conducted CCK8 and transwell assays to evaluate the functional impact of DBH-AS1.

Main Results:

  • Identified 13 immune-related genes associated with improved prognosis and higher antigen-presenting cell levels in RCC.
  • Characterized RCC immune subtypes linked to immunological checkpoints and prognostic variables.
  • DBH-AS1 was identified as a potential antigen for RCC mRNA vaccine development.
  • Overexpression of DBH-AS1 increased proliferation and invasion in RCC cell lines (786-O and Caki-1).

Conclusions:

  • The study provides a theoretical foundation for developing RCC-specific mRNA vaccines.
  • DBH-AS1 emerges as a promising antigen candidate for novel RCC mRNA vaccine strategies.
  • Targeting identified immune-related genes may enhance immunotherapy response in RCC patients.

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