Expression and function analysis of microRNA in collagen-induced arthritis rats
Objectives:
Rheumatoid arthritis is a common autoimmune disease, and microRNAs (miRNAs) are involved in its pathogenesis. This study aims to examine the differentially expressed miRNAs in collagen-induced arthritis (CIA) rats, to analyze the biological functions and the related pathways of the miRNA target genes.
Methods:
The total RNA in the synovium of experimental animals was extracted. The miRNA gene profile was obtained by miRNA microarray. Then the differentially expressed miRNAs were screened and the relevant target mRNAs were predicted. The Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis were performed on the significantly differentially expressed miRNAs.
Results:
There were 69 differentially expressed miRNAs including rno-miR-6215 and rno-miR-709 in CIA rats, of which 22 (31.9%) were up-regulated and 47 (68.1%) were down-regulated. GO and KEGG enrichment analysis showed that the up-regulated miRNA target genes were mainly enriched in cellular metabolism, and they were involved in MAPK and Wnt signaling pathways. The down-regulated miRNA target genes were mainly enriched in nervous system development, and they were involved in axon guidance signaling pathway.
Conclusions:
There are differentially expressed miRNAs in the CIA rat model, which may be involved in metabolism biological functions and signal pathways such as MAPK and Wnt.
Insights
This study identified 69 differentially expressed microRNAs (miRNAs) in a rat model of rheumatoid arthritis. These miRNAs are linked to cellular metabolism and signaling pathways like MAPK and Wnt.
Area of Science:
- Molecular Biology
- Immunology
- Genetics
Background:
- Rheumatoid arthritis (RA) is a prevalent autoimmune disease.
- MicroRNAs (miRNAs) play a role in the pathogenesis of RA.
Purpose of the Study:
- To identify differentially expressed miRNAs in collagen-induced arthritis (CIA) rats.
- To analyze the biological functions and pathways of miRNA target genes.
Main Methods:
- RNA extraction from synovium of experimental animals.
- miRNA gene profiling using miRNA microarray.
- Prediction of target mRNAs and enrichment analysis (GO, KEGG).
Main Results:
- 69 differentially expressed miRNAs were found in CIA rats (22 up-regulated, 47 down-regulated).
- Up-regulated miRNA targets are enriched in cellular metabolism and MAPK/Wnt signaling.
- Down-regulated miRNA targets are enriched in nervous system development and axon guidance pathways.
Conclusions:
- Differentially expressed miRNAs are present in the CIA rat model.
- These miRNAs may influence metabolic functions and signaling pathways (MAPK, Wnt).
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