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The MRN complex and topoisomerase IIIa-RMI1/2 synchronize DNA resection motor proteins
Michael M Soniat1, Giaochau Nguyen1, Hung-Che Kuo1
1Department of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA; Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, Texas, USA.
Abstract:
DNA resection-the nucleolytic processing of broken DNA ends-is the first step of homologous recombination. Resection is catalyzed by the resectosome, a multienzyme complex that includes bloom syndrome helicase (BLM), DNA2 or exonuclease 1 nucleases, and additional DNA-binding proteins. Although the molecular players have been known for over a decade, how the individual proteins work together to regulate DNA resection remains unknown. Using single-molecule imaging, we characterized the roles of the MRE11-RAD50-NBS1 complex (MRN) and topoisomerase IIIa (TOP3A)-RMI1/2 during long-range DNA resection. BLM partners with TOP3A-RMI1/2 to form the BTRR (BLM-TOP3A-RMI1/2) complex (or BLM dissolvasome). We determined that TOP3A-RMI1/2 aids BLM in initiating DNA unwinding, and along with MRN, stimulates DNA2-mediated resection. Furthermore, we found that MRN promotes the association between BTRR and DNA and synchronizes BLM and DNA2 translocation to prevent BLM from pausing during resection. Together, this work provides direct observation of how MRN and DNA2 harness the BTRR complex to resect DNA efficiently and how TOP3A-RMI1/2 regulates the helicase activity of BLM to promote efficient DNA repair.
Insights
The MRE11-RAD50-NBS1 (MRN) complex and TOP3A-RMI1/2 protein complex help the Bloom syndrome helicase (BLM) and DNA2 enzymes efficiently process broken DNA ends during homologous recombination repair.
Area of Science:
- Molecular Biology
- DNA Repair Mechanisms
- Chromosomal Stability
Background:
- Homologous recombination (HR) is a crucial DNA repair pathway for maintaining genomic integrity.
- DNA resection, the initial step in HR, involves processing broken DNA ends by a multi-protein complex called the resectosome.
- The precise roles of individual proteins within the resectosome, particularly the MRE11-RAD50-NBS1 (MRN) complex and TOP3A-RMI1/2, in regulating DNA resection remain poorly understood.
Purpose of the Study:
- To elucidate the functional interplay between the MRN complex, TOP3A-RMI1/2, Bloom syndrome helicase (BLM), and DNA2 during long-range DNA resection.
- To provide direct, single-molecule insights into the regulation of DNA resection by these key protein factors.
Main Methods:
- Single-molecule imaging techniques were employed to visualize and analyze the dynamics of DNA resection.
- Characterization of the roles of the MRN complex and TOP3A-RMI1/2 in conjunction with BLM and DNA2 during DNA end processing.
Main Results:
- The TOP3A-RMI1/2 complex collaborates with BLM to form the BTRR (BLM-TOP3A-RMI1/2) complex, aiding in DNA unwinding initiation.
- Both TOP3A-RMI1/2 and the MRN complex stimulate DNA2-mediated resection.
- The MRN complex enhances BTRR binding to DNA and synchronizes the translocation of BLM and DNA2, preventing BLM pausing and ensuring efficient resection.
Conclusions:
- The MRN complex and TOP3A-RMI1/2 are essential regulators that harness the BTRR complex for efficient DNA resection.
- TOP3A-RMI1/2 modulates BLM helicase activity, contributing to effective DNA repair and genomic stability.
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