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Updated: Aug 15, 2025

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Cryo-EM and Single-Particle Analysis with Scipion
Published on: May 29, 2021
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Frozen in time: analyzing molecular dynamics with time-resolved cryo-EM
Sascha Josef Amann1, Demian Keihsler2, Tatyana Bodrug3
1IMP - Research Institute of Molecular Pathology, Campus-Vienna-Biocenter 1, 1030 Vienna, Austria; Vienna BioCenter PhD Program, a Doctoral School of the University of Vienna and Medical University of Vienna, A-1030 Vienna, Austria.
Structure (London, England : 1993)
|December 30, 2022
Summary
Time-resolved cryo-electron microscopy (trEM) captures fleeting molecular machine states. This method accelerates reactions to visualize transient intermediates, advancing our understanding of complex biological processes.
Area of Science:
- Biophysics
- Structural Biology
- Biochemistry
Background:
- Molecular machines harness thermal energy for complex tasks, utilizing restricted motion and Brownian ratchets.
- Functional cycles involve initialization, processing, and termination, with major states often visualized by cryo-electron microscopy (cryo-EM).
- The precise timing and coordination of intermediate steps within these cycles remain challenging to study.
Purpose of the Study:
- To review the methodological advancements in time-resolved cryo-electron microscopy (trEM).
- To highlight the applications of trEM in addressing biological questions.
- To explain how trEM enables visualization of short-lived intermediate states.
Main Methods:
- Development of time-resolved cryo-electron microscopy (trEM) techniques.
- Shortening reaction times to enrich pre-equilibrium states for imaging.
- Application of trEM to study molecular machine dynamics.
Main Results:
- trEM methodology has been refined for capturing transient molecular states.
- The approach allows for the investigation of previously elusive intermediate steps.
- trEM has been successfully applied to diverse biological systems.
Conclusions:
- trEM is a powerful technique for visualizing dynamic molecular processes.
- Methodological developments have expanded the utility of trEM.
- This technique provides crucial insights into the temporal coordination of molecular machines.

