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Updated: Aug 15, 2025

Medium-throughput Screening Assays for Assessment of Effects on Ca2+-Signaling and Acrosome Reaction in Human Sperm
Published on: March 1, 2019
Biallelic mutations in CFAP54 cause male infertility with severe MMAF and NOA
Shixiong Tian1,2, Chaofeng Tu3,4, Xiaojin He5,6,7
1Institute of Metabolism and Integrative Biology, State Key Laboratory of Genetic Engineering, Human Phenome Institute, Obstetrics and Gynecology Hospital, Fudan University, Shanghai, China.
Background:
Spermatogenic impairments can lead to male infertility by different pathological conditions, such as multiple morphological abnormalities of the sperm flagella (MMAF) and non-obstructive azoospermia (NOA). Genetic factors are involved in impaired spermatogenesis.
Methods And Results:
Here, we performed genetic analyses through whole-exome sequencing in a cohort of 334 Han Chinese probands with severe MMAF or NOA. Biallelic variants of CFAP54 were identified in three unrelated men, including one homozygous frameshift variant (c.3317del, p.Phe1106Serfs*19) and two compound heterozygous variants (c.878G>A, p.Arg293His; c.955C>T, p.Arg319Cys and c.4885C>T, p.Arg1629Cys; c.937G>A, p.Gly313Arg). All of the identified variants were absent or extremely rare in the public human genome databases and predicted to be damaging by bioinformatic tools. The men harbouring CFAP54 mutations exhibited abnormal sperm morphology, reduced sperm concentration and motility in ejaculated semen. Significant axoneme disorganisation and other ultrastructure abnormities were also detected inside the sperm cells from men harbouring CFAP54 mutations. Furthermore, immunofluorescence assays showed remarkably reduced staining of four flagellar assembly-associated proteins (IFT20, IFT52, IFT122 and SPEF2) in the spermatozoa of CFAP54-deficient men. Notably, favourable clinical pregnancy outcomes were achieved with sperm from men carrying CFAP54 mutations after intracytoplasmic sperm injection treatment.
Conclusion:
Our genetic analyses and experimental observations revealed that biallelic deleterious mutations of CFAP54 can induce severe MMAF and NOA in humans.
Insights
Genetic mutations in CFAP54 cause male infertility, specifically multiple morphological abnormalities of the sperm flagella (MMAF) and non-obstructive azoospermia (NOA). These findings offer new insights into male reproductive health.
Area of Science:
- Genetics
- Reproductive Biology
- Human Molecular Genetics
Background:
- Spermatogenic impairments, including multiple morphological abnormalities of the sperm flagella (MMAF) and non-obstructive azoospermia (NOA), are significant causes of male infertility.
- Genetic factors are increasingly recognized as crucial contributors to impaired spermatogenesis.
Purpose of the Study:
- To investigate the genetic underpinnings of severe MMAF and NOA in a cohort of Han Chinese males.
- To identify specific gene variants associated with these infertility conditions.
Main Methods:
- Whole-exome sequencing was performed on 334 Han Chinese probands diagnosed with severe MMAF or NOA.
- Identified variants were analyzed for their novelty and predicted pathogenicity using bioinformatic tools.
- Sperm morphology, concentration, motility, and ultrastructure were assessed in affected individuals.
- Immunofluorescence assays were used to evaluate the expression of flagellar assembly-associated proteins.
Main Results:
- Biallelic variants in the CFAP54 gene were identified in three unrelated men with MMAF or NOA.
- The identified CFAP54 mutations were novel, absent in public databases, and predicted to be damaging.
- Men with CFAP54 mutations displayed abnormal sperm characteristics and ultrastructural defects.
- Reduced expression of key flagellar assembly proteins (IFT20, IFT52, IFT122, SPEF2) was observed in CFAP54-deficient spermatozoa.
- Successful clinical pregnancies were achieved using sperm from these men following intracytoplasmic sperm injection.
Conclusions:
- Biallelic deleterious mutations in CFAP54 are a cause of severe MMAF and NOA in humans.
- CFAP54 mutations disrupt sperm flagellar structure and function, leading to male infertility.
- Sperm from CFAP54 mutation carriers can be used for assisted reproductive technologies, such as intracytoplasmic sperm injection, to achieve pregnancy.
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