Related Experiment Video
Updated: Aug 12, 2025

Author Spotlight: Investigating the Impact of Emotional Prosodies on Voice Recognition and Perception
Published on: August 9, 2024
Constructing Collective Variables Using Invariant Learned Representations
Martin Šípka1,2, Andreas Erlebach1, Lukáš Grajciar1
1Department of Physical and Macromolecular Chemistry, Faculty of Sciences, Charles University, Hlavova 8, 128 43 Prague 2, Czech Republic.
Discovering collective variables for rare chemical reactions in atomistic simulations is challenging. This study introduces a novel machine learning method for automated collective variable discovery, improving efficiency and accuracy in complex catalysis.
Area of Science:
- Computational chemistry
- Materials science
- Chemical engineering
Background:
- Atomistic simulations model chemical reactions as rare events, necessitating bias along collective variables (CVs).
- Identifying suitable CVs a priori is often complex and challenging for accurate reaction pathway exploration.
Purpose of the Study:
- To develop a novel, automated method for discovering collective variables (CVs) in chemical reactions.
- To enable efficient and accurate atomistic simulations of rare chemical events, particularly in complex catalytic systems.
Main Methods:
- A new method for CV discovery using dimensionality reduction of atomic representation vectors.
- Employing linear-scaling and invariant representations, either fixed or learned via supervised training of machine learning potentials.
- Demonstration on four high-barrier reactions, including gas-phase and heterogeneous catalysis.
Main Results:
- The proposed method demonstrates high data efficiency and automated feature extraction.
- Learned representations capture both structural and energetic features, transferable across reactions.
- Successful application to complex reactions in heterogeneous catalysts, showcasing favorable scaling and invariance preservation.
Conclusions:
- This approach facilitates fast and largely automatic construction of suitable CVs for complex reactive scenarios.
- The method is expected to significantly advance the study of reactive/catalytic transformations, including those at solid-liquid interfaces.
Related Concept Videos
Associative Learning
Classical conditioning, also known...
Stereotype Content Model
Vector Algebra: Method of Components
In many applications, the magnitudes and directions of...
01:19Learned Behavior I
State Space Representation
Consider an RLC circuit, a...
Control Volume and System Representations
The control volume approach considers a stationary region in space through which fluid flows. This region is bounded by a control surface. For instance, in the case of water...

