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Updated: Aug 9, 2025

Detection and Isolation of Apoptotic Bodies to High Purity
Published on: August 12, 2018
Nanoscale imaging of CD47 informs how plasma membrane modifications shape apoptotic cell recognition
Samy Dufour1, Pascale Tacnet-Delorme1, Jean-Philippe Kleman1
1Univ. Grenoble Alpes, CNRS, CEA, IBS, F-38000, Grenoble, France.
Abstract:
CD47 recognized by its macrophage receptor SIRPα serves as a "don't eat-me" signal protecting viable cells from phagocytosis. How this is abrogated by apoptosis-induced changes in the plasma membrane, concomitantly with exposure of phosphatidylserine and calreticulin "eat-me" signals, is not well understood. Using STORM imaging and single-particle tracking, we interrogate how the distribution of these molecules on the cell surface correlates with plasma membrane alteration, SIRPα binding, and cell engulfment by macrophages. Apoptosis induces calreticulin clustering into blebs and CD47 mobility. Modulation of integrin affinity impacts CD47 mobility on the plasma membrane but not the SIRPα binding, whereas CD47/SIRPα interaction is suppressed by cholesterol destabilization. SIRPα no longer recognizes CD47 localized on apoptotic blebs. Overall, the data suggest that disorganization of the lipid bilayer at the plasma membrane, by inducing inaccessibility of CD47 possibly due to a conformational change, is central to the phagocytosis process.
Insights
The "don't eat-me" signal CD47 (Cluster of Differentiation 47) is crucial for cell survival. Apoptosis disrupts CD47 function by altering the plasma membrane, enabling phagocytosis.
Area of Science:
- Cell Biology
- Immunology
- Biophysics
Background:
- CD47 acts as a
- don't eat-me
- signal, preventing phagocytosis by macrophages via SIRPα (Signal Regulatory Protein Alpha).
- The mechanism by which apoptosis-induced plasma membrane changes abrogate CD47 function and expose
- eat-me
- signals like phosphatidylserine and calreticulin remains unclear.
Purpose of the Study:
- To investigate the relationship between plasma membrane alterations during apoptosis, the distribution of CD47 and
- eat-me
- signals, SIRPα binding, and macrophage-mediated phagocytosis.
- To elucidate how CD47 mobility and accessibility are affected by apoptosis and membrane changes.
Main Methods:
- Super-resolution microscopy (STORM) for high-resolution imaging of cell surface molecules.
- Single-particle tracking to analyze molecular dynamics.
- Investigating the impact of lipid bilayer modifications (e.g., cholesterol levels) and integrin affinity on CD47 behavior.
Main Results:
- Apoptosis leads to calreticulin clustering in blebs and increased CD47 mobility.
- CD47 mobility is influenced by integrin affinity, but SIRPα binding is not directly affected.
- Cholesterol destabilization disrupts CD47/SIRPα interaction, and SIRPα fails to recognize CD47 on apoptotic blebs.
- Plasma membrane disorganization, potentially causing CD47 conformational changes and inaccessibility, is key to initiating phagocytosis.
Conclusions:
- Plasma membrane lipid bilayer disorganization during apoptosis is central to abrogating CD47's
- don't eat-me
- signal.
- Inaccessibility of CD47, possibly due to conformational changes induced by membrane alterations, facilitates phagocytosis.
- Understanding these mechanisms provides insights into immune evasion strategies and potential therapeutic targets.
Related Concept Videos
Phagocytosis of Apoptotic Cells
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The Extrinsic Apoptotic Pathway

