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Revisiting aliasing noise to build more robust sparsity in nonuniform sampling 2D-NMR
Lucille E Cullen1, Alan Marchiori2, David Rovnyak1
1Department of Chemistry, Bucknell University, Lewisburg, Pennsylvania, 17837, USA.
Nonuniform sampling (NUS) in 2D NMR can cause artifacts. This study identifies repeat sequences in sampling schedules as a cause and proposes solutions like initial uniform sampling to reduce noise and improve spectral reconstruction.
Area of Science:
- Nuclear Magnetic Resonance (NMR) Spectroscopy
- Data Acquisition and Processing
Background:
- Nonuniform sampling (NUS) is crucial for accelerating 2D NMR experiments, especially for small molecules.
- Subsampling below 50% coverage in NUS can introduce artifacts, often referred to as sampling noise.
- Weak aliasing artifacts are a growing concern with increasingly sparse NUS schedules.
Purpose of the Study:
- To investigate the causes of artifacts in 1D NUS of 2D NMR spectra.
- To develop strategies for mitigating sampling noise and improving spectral quality in sparse NUS.
- To create practical 'one-click' NUS schedules for wider application.
Main Methods:
- Revisiting potential causes of artifacts in 1D NUS of 2D NMR.
- Implementing a convolutional filter-based screening approach to detect repeat sequences in sampling schedules.
- Evaluating the impact of initial uniform sampling periods on artifact reduction.
- Testing strategies on HSQC and LR-HSQMBC experiments.
Main Results:
- Repeat sequences in dense sampling regions of sparse NUS schedules cause aliasing artifacts.
- Sampling schedules with low proportions of repeat sequences exhibit significantly reduced artifacts.
- A short period (2%-4%) of initial uniform sampling effectively suppresses sampling noise.
- Robust spectral reconstructions using iterative soft thresholding (IST) are achieved even with sparse NUS.
Conclusions:
- Identifying and avoiding repeat sequences in NUS schedules is key to reducing spectral artifacts.
- Incorporating brief initial uniform sampling periods is an effective remediation strategy for sparse NUS.
- Developed 'one-click' schedules offer a practical solution for broader adoption of robust NUS techniques.
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