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Updated: Aug 5, 2025

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A Complete Pipeline for Isolating and Sequencing MicroRNAs, and Analyzing Them Using Open Source Tools
Published on: August 21, 2019
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Insights into Online microRNA Bioinformatics Tools
Diana Luna Buitrago1, Ruth C Lovering2, Andrea Caporali1
1BHF Centre for Cardiovascular Science, The Queen's Medical Research Institute, University of Edinburgh, Edinburgh EH164TJ, UK.
Non-Coding RNA
|March 24, 2023
Summary
MicroRNAs (miRNAs) are small non-coding RNAs regulating gene expression. This review highlights online tools for exploring miRNA sequences, targets, disease associations, pathways, and genetic variants.
Area of Science:
- Molecular Biology
- Genomics
- Bioinformatics
Background:
- MicroRNAs (miRNAs) are crucial non-coding RNA molecules that regulate gene expression post-transcriptionally.
- MiRNAs play significant roles in diverse biological functions and disease development.
- The field of miRNA research has expanded, emphasizing the need for accessible data and analytical tools.
Purpose of the Study:
- To provide an overview of available online resources for miRNA research.
- To guide researchers in investigating miRNA sequences, target prediction, and validation.
- To cover tools for analyzing disease-associated miRNAs, pathway involvement, and miRNA genetic variations.
Main Methods:
- Literature review of existing online bioinformatics tools.
- Categorization of resources based on research aspects (sequences, targets, disease, pathways, variants).
- Synthesis of information on the utility and scope of each resource.
Main Results:
- Identification of numerous online tools facilitating miRNA research.
- Detailed description of resources for sequence analysis and target prediction/validation.
- Summary of tools for exploring miRNA-disease associations, pathway analysis, and genetic variants.
Conclusions:
- A wide array of bioinformatics tools are available to support comprehensive miRNA research.
- These resources aid in understanding miRNA functions, regulatory mechanisms, and clinical relevance.
- Effective utilization of these tools can accelerate discoveries in molecular biology and disease research.

