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Updated: Aug 3, 2025

Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions
Published on: September 28, 2017
RNA-binding proteins in cancer drug discovery
Jean B Bertoldo1, Simon Müller2, Stefan Hüttelmaier3
1Children's Cancer Institute, Lowy Cancer Research Centre, UNSW Sydney, Sydney, NSW, Australia; School of Clinical Medicine, UNSW Sydney, Sydney, NSW, Australia.
Abstract:
RNA-binding proteins (RBPs) are crucial players in tumorigenesis and, hence, promising targets in cancer drug discovery. However, they are largely regarded as 'undruggable', because of the often noncatalytic and complex interactions between protein and RNA, which limit the discovery of specific inhibitors. Nonetheless, over the past 10 years, drug discovery efforts have uncovered RBP inhibitors with clinical relevance, highlighting the disruption of RNA-protein networks as a promising avenue for cancer therapeutics. In this review, we discuss the role of structurally distinct RBPs in cancer, and the mechanisms of RBP-directed small-molecule inhibitors (SMOIs) focusing on drug-protein interactions, binding surfaces, potency, and translational potential. Additionally, we underline the limitations of RBP-targeting drug discovery assays and comment on future trends in the field.
Insights
RNA-binding proteins (RBPs) are key in cancer, but challenging to target. This review explores RBP inhibitors, their mechanisms, and potential for cancer drug discovery.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- RNA-binding proteins (RBPs) play significant roles in cancer development.
- RBPs are often considered 'undruggable' due to complex RNA-protein interactions.
- Targeting RNA-protein interactions is an emerging strategy in cancer therapy.
Purpose of the Study:
- To review the role of structurally distinct RBPs in cancer.
- To discuss mechanisms of small-molecule inhibitors (SMOIs) targeting RBPs.
- To evaluate the translational potential of RBP-directed therapies.
Main Methods:
- Literature review of RBP roles in cancer.
- Analysis of RBP-directed small-molecule inhibitors (SMOIs).
- Examination of drug-protein interactions, binding surfaces, and potency.
Main Results:
- Over the past decade, clinically relevant RBP inhibitors have been developed.
- Disruption of RNA-protein networks shows therapeutic promise.
- Small-molecule inhibitors target specific RBP functions and interactions.
Conclusions:
- Targeting RBPs represents a promising, albeit challenging, avenue for cancer drug discovery.
- Understanding drug-protein interactions and binding surfaces is crucial for developing effective SMOIs.
- Further development of assays and strategies is needed to overcome limitations in RBP-targeting drug discovery.
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