Related Experiment Video
Updated: Jul 30, 2025

08:07
Single Molecule Fluorescence Energy Transfer Study of Ribosome Protein Synthesis
Published on: July 6, 2021
2.7K
SnapShot: Eukaryotic ribosome biogenesis I.
Ed Hurt1, Jingdong Cheng2, Jochen Baβler1
1Heidelberg University Biochemistry Center (BZH), Heidelberg, Germany.
Cell
|May 12, 2023
Summary
Cellular ribosome production is essential and involves over 200 assembly factors. This study visualizes key steps in small ribosome biogenesis, revealing mechanisms of 40S subunit synthesis.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Ribosome production is a fundamental cellular process crucial for protein synthesis.
- Dysregulation of ribosome biogenesis is linked to various human diseases.
- The process involves a complex interplay of approximately 200 assembly factors.
Purpose of the Study:
- To elucidate the structural mechanisms underlying small ribosome (40S subunit) biogenesis.
- To visualize the dynamic pathway of ribosome assembly from initial pre-ribosomes to mature subunits.
Main Methods:
- Utilizing structural biology techniques to capture snapshots of biogenesis intermediates.
- Analyzing structural data of early 90S pre-ribosomes and later assembly stages.
Main Results:
- Detailed structural insights into the ordered pathway of ribosome assembly.
- Identification of key structural intermediates in the formation of the 40S ribosomal subunit.
- Unraveling the functional roles of assembly factors during biogenesis.
Conclusions:
- Structural snapshots provide critical mechanistic understanding of small ribosome synthesis.
- The findings illuminate the intricate process of ribosome production, vital for cellular function.
- This work contributes to understanding the molecular basis of ribosome biogenesis-related diseases.
Related Concept Videos
Ribosomal RNA Synthesis
13.3K
Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
13.3K
Ribosomes
68.5K
Ribosomes translate genetic information encoded by messenger RNA (mRNA) into proteins. Both prokaryotic and eukaryotic cells have ribosomes. Cells that synthesize large quantities of protein—such as secretory cells in the human pancreas—can contain millions of ribosomes.
Ribosome Structure and Assembly
Ribosomes are composed of ribosomal RNA (rRNA) and proteins. In eukaryotes, rRNA is transcribed from genes in the nucleolus—a part of the nucleus that specializes in ribosome...
Ribosome Structure and Assembly
Ribosomes are composed of ribosomal RNA (rRNA) and proteins. In eukaryotes, rRNA is transcribed from genes in the nucleolus—a part of the nucleus that specializes in ribosome...
68.5K
Initiation of Translation
34.3K
Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
34.3K
Ribosome Profiling
3.6K
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.6K
Translation in Prokaryotes
72
Prokaryote translation is a complex, highly coordinated process that converts genetic information from mRNA into functional proteins. It involves three stages: initiation, elongation, and termination, each facilitated by specific molecular components.Initiation of TranslationThe process begins with the assembly of the ribosomal subunits and initiation factors on the mRNA. In bacteria, the 30S ribosomal subunit recognizes the Shine-Dalgarno sequence in the mRNA, a conserved region upstream of...
72
Improving Translational Accuracy
11.7K
Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
11.7K

