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Updated: Jul 10, 2026

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In Vivo Visualization of Spontaneous Activity in Neonatal Mouse Sensory Cortex at a Single-Neuron Resolution
Published on: November 21, 2023
Map of spiking activity underlying change detection in the mouse visual system
Corbett Bennett1, Samuel D Gale1, Greggory Heller2
1Allen Institute/Neural Dynamics, Seattle, WA 98109, USA.
Cell
|July 8, 2026
Summary
This study maps neural activity across the mouse visual system during an image change detection task. Findings reveal how brain circuits process visual information and adapt to new stimuli, crucial for sensorimotor computation.
Area of Science:
- Neuroscience
- Computational Neuroscience
- Systems Neuroscience
Background:
- Understanding complex visual behavior requires large-scale, dense neural recordings across multiple brain areas.
- Hierarchically organized brain circuits coordinate activity for visual processing.
Purpose of the Study:
- To create a comprehensive database of spiking activity across the mouse visual system (cortex, thalamus, midbrain).
- To map area-, cortical-layer-, and cell-type-specific coding of sensory and motor information during a visual task.
Main Methods:
- Utilized Neuropixels probes to record from over 75,000 neural units in 54 mice.
- Mice performed an image change detection task.
- Analyzed neural activity for modulation by task engagement and novel stimuli, employing population decoding and optogenetics.
Main Results:
- Task engagement modulation increased across the thalamocortical hierarchy, peaking in the midbrain.
- Novel images activated a broader cortical population and affected later cortical, but not thalamic, responses.
- Identified a critical time window for change detection, suggesting an adaptation-based strategy.
Conclusions:
- The developed database provides a valuable resource for studying sensorimotor computations.
- Neural processing of visual information involves hierarchical engagement and adaptation mechanisms.
- This work elucidates the neural basis of visual perception and decision-making.

