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Ensemble machine learning methods in screening electronic health records: A scoping review.
Christophe At Stevens1, Alexander Rm Lyons1, Kanika I Dharmayat1
1Imperial Centre for Cardiovascular Disease Prevention (ICCP), Department of Primary Care and Public Health, School of Public Health, Imperial College London, London, UK.
Ensemble machine learning models show promise for screening electronic health records for diseases. Complex models often perform best but are underutilized, and reporting needs improvement for clinical research.
Area of Science:
- Computational biology
- Medical informatics
- Machine learning
Background:
- Electronic health records (EHRs) offer potential for identifying undiagnosed individuals using machine learning (ML).
- Ensemble ML models, combining multiple predictions, are often superior to single models for predictive tasks.
- A literature review on ensemble ML for EHR-based medical pre-screening is lacking.
Purpose of the Study:
- To conduct a scoping review of literature on ensemble ML models for EHR screening.
- To analyze the performance and application of different ensemble ML types in medical pre-screening.
Main Methods:
- Searched EMBASE and MEDLINE databases using terms for medical screening, EHRs, and ML.
- Included 145 articles meeting inclusion criteria from 3355 retrieved.
- Followed PRISMA scoping review guidelines for data collection and analysis.
Main Results:
- Ensemble ML models are increasingly used across medical specialties and often outperform non-ensemble methods.
- Complex combination strategies and heterogeneous classifiers in ensemble models showed superior performance but were less frequently used.
- Methodologies, processing steps, and data sources for ensemble ML models were often poorly described.
Conclusions:
- Comparing diverse ensemble ML model performances is crucial for effective EHR screening.
- Standardized and comprehensive reporting of ML methodologies in clinical research is essential for reproducibility and advancement.
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