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ChagasDB: 80 years of publicly available data on the molecular host response to Trypanosoma cruzi infection in a
Pauline Brochet1, Jean-Christophe Mouren1, Laurent Hannouche2
1Institut National de la Santé Et de la Recherche Médicale (INSERM), Unité Mixte de Recherche (UMR)_1090, Aix Marseille Université, TAGC Theories and Approaches of Genomic Complexity, Institut MarMaRa, Marseille 13288, France.
Insights
Chagas disease research is advanced by ChagasDB, a manually curated database of molecules affected by Trypanosoma cruzi infection. This accessible online resource aids scientists studying this widespread parasitic disease.
Area of Science:
- Parasitology
- Molecular Biology
- Bioinformatics
Background:
- Chagas disease, caused by Trypanosoma cruzi, affects millions globally, leading to severe chronic conditions with no current treatment.
- Approximately 10,000 deaths occur annually, with 30% of infected individuals developing serious cardiac, digestive, or neurological complications.
Purpose of the Study:
- To create a centralized, accessible database (ChagasDB) to facilitate Chagas disease research.
- To compile and organize information on host molecules deregulated by Trypanosoma cruzi infection.
Main Methods:
- Manual curation of all PubMed-referenced papers on Chagas disease.
- Retrieval and inclusion of data on deregulated host molecules following T. cruzi infection.
- Development of a user-friendly website for database accessibility.
Main Results:
- Construction of ChagasDB, a comprehensive database of host molecules affected by T. cruzi.
- A publicly accessible website (https://chagasdb.tagc.univ-amu.fr) has been launched.
- The database provides a valuable resource for researchers studying Chagas disease.
Conclusions:
- ChagasDB significantly enhances the accessibility of curated data for Chagas disease research.
- The database serves as a crucial tool for understanding host-parasite interactions and identifying potential therapeutic targets.
- Facilitating research through ChagasDB is vital for developing effective treatments for Chagas disease.
Abstract:
Chagas disease is a parasitical disease caused by Trypanosoma cruzi which affects ∼7 million people worldwide. Per year, ∼10 000 people die from this pathology. Indeed, ∼30% of humans develop severe chronic forms, including cardiac, digestive or neurological disorders, for which there is still no treatment. In order to facilitate research on Chagas disease, a manual curation of all papers corresponding to 'Chagas disease' referenced on PubMed has been performed. All deregulated molecules in hosts (all mammals, humans, mice or others) following T. cruzi infection were retrieved and included in a database, named ChagasDB. A website has been developed to make this database accessible to all. In this article, we detail the construction of this database, its contents and how to use it. Database URL https://chagasdb.tagc.univ-amu.fr.
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