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Stable and scalable computation of state visitation probabilities in finite Markov chains
Daniel J Sharpe1, David J Wales1
1Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom.
Abstract:
We report an algorithm based on renormalization to compute the probability that a particular state, or set thereof, is visited along the first passage or transition paths between two endpoint states of a finite Markov chain. The procedure is numerically stable and does not require dense storage of the transition matrix.
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