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The Journal of Chemical Physics|October 16, 2021
Nearly reducible finite Markov chains: Theory and algorithmsDaniel J Sharpe, David J WalesThe Journal of Chemical Physics|June 5, 2023
Stable and scalable computation of state visitation probabilities in finite Markov chainsDaniel J Sharpe, David J WalesPhysical Review. E|July 17, 2021
Graph transformation and shortest paths algorithms for finite Markov chainsDaniel J Sharpe, David J WalesPhysical Review. E|August 20, 2021
Numerical analysis of first-passage processes in finite Markov chains exhibiting metastabilityDaniel J Sharpe, David J WalesThe Journal of Chemical Physics|October 3, 2019
Identifying mechanistically distinct pathways in kinetic transition networksDaniel J Sharpe, David J WalesThe Journal of Chemical Physics|July 17, 2020
Efficient and exact sampling of transition path ensembles on Markovian networksDaniel J Sharpe, David J WalesThe Journal of Physical Chemistry. B|April 28, 2020
Energy Landscapes of Deoxyxylo- and Xylo-Nucleic Acid OctamersDaniel J Sharpe, Konstantin Röder, David J WalesThe Journal of Physical Chemistry Letters|October 15, 2019
Energy Landscapes and Hybridization Pathways for DNA Hexamer DuplexesShiyan Xiao, Daniel J Sharpe, Debayan Chakraborty, et al.The Journal of Chemical Physics|October 9, 2020
Rare events and first passage time statistics from the energy landscapeThomas D Swinburne, Deepti Kannan, Daniel J Sharpe, et al.The Journal of Chemical Physics|December 31, 2020
Optimal dimensionality reduction of Markov chains using graph transformationDeepti Kannan, Daniel J Sharpe, Thomas D Swinburne, et al.Pageof 26