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Updated: Jul 27, 2025

Nuclei Isolation from Adult Mouse Kidney for Single-Nucleus RNA-Sequencing
Published on: September 20, 2021
Meta-analysis of single-cell and single-nucleus transcriptomics reveals kidney cell type consensus signatures
Marceau Quatredeniers1, Alice S Serafin2, Alexandre Benmerah2
1Université de Paris Cité, Imagine Institute, Laboratory of Hereditary Kidney Diseases, Paris, INSERM UMR 1163, F-75015, France. quatredeniers.marceau@gmail.com.
None:
While the amount of studies involving single-cell or single-nucleus RNA-sequencing technologies grows exponentially within the biomedical research area, the kidney field requires reference transcriptomic signatures to allocate each cluster its matching cell type. The present meta-analysis of 39 previously published datasets, from 7 independent studies, involving healthy human adult kidney samples, offers a set of 24 distinct consensus kidney cell type signatures. The use of these signatures may help to assure the reliability of cell type identification in future studies involving single-cell and single-nucleus transcriptomics while improving the reproducibility in cell type allocation.

