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Class modelling by Soft Independent Modelling of Class Analogy: why, when, how? A tutorial
Raffaele Vitale1, Marina Cocchi2, Alessandra Biancolillo3
1U. Lille, CNRS, LASIRE, Laboratoire Avancé de Spectroscopie pour les Interactions, la Réactivité et l'Environnement, Cité Scientifique, F-59000 Lille, France.
This tutorial provides guidelines for using Soft Independent Modelling of Class Analogy (SIMCA) for classification. It covers the fundamentals, variants, parameter tuning, assessment, and validation of SIMCA models.
Area of Science:
- Chemometrics
- Machine Learning
- Data Analysis
Background:
- Soft Independent Modelling of Class Analogy (SIMCA) is a pattern recognition technique.
- Effective utilization of SIMCA requires understanding its principles and practical application.
- Existing resources may lack comprehensive guidance on SIMCA implementation and validation.
Purpose of the Study:
- To provide a comprehensive tutorial on Soft Independent Modelling of Class Analogy (SIMCA) for classification.
- To offer pragmatic guidelines for the correct and sensible use of SIMCA.
- To answer fundamental questions regarding the application, timing, and methodology of SIMCA.
Main Methods:
- Detailed explanation of the mathematical and statistical foundations of the SIMCA approach.
- Comparison of distinct SIMCA algorithm variants using two case studies.
- Development of a flowchart for optimizing SIMCA model parameters.
Main Results:
- Presentation of figures of merit and graphical tools for assessing SIMCA models.
- Inclusion of computational details and suggestions for SIMCA model validation.
- Introduction of a novel MATLAB toolbox for running and contrasting SIMCA versions.
Conclusions:
- The tutorial equips users with the knowledge to effectively employ SIMCA for classification tasks.
- The provided flowchart and validation strategies facilitate optimal SIMCA model performance.
- The accompanying MATLAB toolbox enhances the practical application and comparison of different SIMCA methodologies.
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