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Updated: Jul 25, 2025

Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Emerging Antimicrobial Resistance
Cynthia E Flynn1, Jeannette Guarner2
1Department of Pathology, Christiana Care, Wilmington, Delaware.
Abstract:
The burden of emerging antimicrobial resistance (AMR) in the United States is significant and even greater worldwide. Mitigation efforts have decreased the incidence and deaths from antimicrobial-resistant organisms in the United States. Yet more than 2.8 million antimicrobial-resistant infections occur every year and more than 35,000 patients die as a result. Infection prevention and control, data tracking, antimicrobial stewardship, vaccines, therapeutics, diagnostics, and sanitation are all required to decrease AMR threats. In 2019, in the second version of the Centers for Disease Control and Prevention (CDC) report on antibiotic-resistant threats, the agency categorized AMR threats as urgent, serious, concerning, or to be watched. This review will discuss the following aspects of each bacterium in the CDC report: estimated numbers of cases and deaths, identify the better known and impactful mechanisms of resistance, diagnostic testing and its limitations, and current and possible future therapies. This review also presents anatomical pathology case examples that highlight the altered morphology of antibiotic partially treated bacteria in tissues.
Insights
Antimicrobial resistance (AMR) causes millions of infections and thousands of deaths annually in the US. This review details urgent threats, resistance mechanisms, diagnostics, and therapies to combat AMR.
Area of Science:
- Microbiology
- Infectious Diseases
- Public Health
Background:
- Antimicrobial resistance (AMR) poses a significant global health threat, with millions of infections and tens of thousands of deaths annually in the United States.
- Despite mitigation efforts, AMR remains a critical challenge, necessitating comprehensive strategies for control and prevention.
Purpose of the Study:
- To review the Centers for Disease Control and Prevention's (CDC) categorized list of antibiotic-resistant threats.
- To detail the epidemiology, resistance mechanisms, diagnostics, and therapeutic strategies for key AMR pathogens.
- To present pathological findings of partially treated bacteria in tissues.
Main Methods:
- Review of the 2019 CDC report on antibiotic-resistant threats.
- Analysis of epidemiological data, resistance mechanisms, diagnostic limitations, and current/future therapies for categorized bacteria.
- Inclusion of anatomical pathology case examples illustrating morphological changes in antibiotic-treated bacteria.
Main Results:
- The CDC categorizes AMR threats into urgent, serious, and concerning groups.
- Specific details on cases, deaths, resistance mechanisms, diagnostics, and therapies are provided for each bacterium.
- Pathology examples highlight morphological alterations in bacteria under partial antibiotic treatment.
Conclusions:
- A multi-faceted approach including infection control, stewardship, and novel therapies is crucial to mitigate AMR.
- Understanding resistance mechanisms and improving diagnostics are key to effective treatment.
- Continued surveillance and research are vital to combat the evolving threat of antimicrobial resistance.
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