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Pool testing with dilution effects and heterogeneous priors
1Business School, Pontificia Universidad Católica de Chile, Vicuña Mackenna 4860, Macul, Santiago, Chile. gsaraiva@uc.cl.
Abstract:
The Dorfman pooled testing scheme is a process in which individual specimens (e.g., blood, urine, swabs, etc.) are pooled and tested together; if the merged sample tests positive for infection, then each specimen from the pool is tested individually. Through this procedure, laboratories can reduce the expected number of tests required to screen the population, as individual tests are only carried out when the pooled test detects an infection. Several different partitions of the population can be used to form the pools. In this study, we analyze the performance of ordered partitions, those in which subjects with similar probability of infection are pooled together. We derive sufficient conditions under which ordered partitions outperform other types of partitions in terms of minimizing the expected number of tests, the expected number of false negatives, and the expected number of false positive classifications. These sufficient conditions can be easily verified in practical applications once the dilution effect has been estimated. We also propose a measure of equity and present conditions under which this measure is maximized by ordered partitions.
Insights
Ordered partitions in Dorfman pooled testing can reduce the number of tests needed and improve accuracy. This method groups individuals with similar infection probabilities, optimizing screening efficiency and fairness.
Area of Science:
- Epidemiology
- Biostatistics
- Public Health
Background:
- Pooled testing, like the Dorfman scheme, combines individual samples to reduce screening costs.
- Traditional pooling methods may not optimize test efficiency or accuracy.
- The choice of how to group individuals (partitioning) significantly impacts pooled testing performance.
Purpose of the Study:
- To analyze the performance of ordered partitions in Dorfman pooled testing.
- To identify conditions where ordered partitions minimize expected tests, false negatives, and false positives.
- To propose and evaluate an equity measure for pooled testing strategies.
Main Methods:
- Mathematical analysis of ordered partitions within the Dorfman pooled testing framework.
- Derivation of sufficient conditions for performance optimization.
- Development and analysis of an equity metric for population screening.
Main Results:
- Ordered partitions can outperform other partitioning strategies in minimizing expected tests and classification errors.
- Sufficient conditions for the superiority of ordered partitions are derived and verifiable.
- Conditions for maximizing an equity measure using ordered partitions are established.
Conclusions:
- Ordered partitions offer an efficient and potentially more equitable approach to population screening using Dorfman pooled testing.
- The findings provide practical guidelines for implementing optimized pooled testing strategies.
- Further research into dilution effects and equity is warranted for refining pooled testing protocols.
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