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Related Concept Videos

CRISPR/Cas9 Genome Editing01:28

CRISPR/Cas9 Genome Editing

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The CRISPR-Cas system serves as a bacterial defense mechanism against invading genetic elements such as viruses and plasmids, forming the foundation for its adaptation as a powerful genome-editing tool. Originally discovered in prokaryotes, this system has been repurposed to revolutionize genetic engineering across a wide range of organisms, including plants, animals, and humans. The core component, Cas9, is an endonuclease derived from Streptococcus pyogenes, capable of introducing...
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RNA Editing02:23

RNA Editing

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RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
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CRISPR01:59

CRISPR

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Genome editing technologies allow scientists to modify an organism’s DNA via the addition, removal, or rearrangement of genetic material at specific genomic locations. These types of techniques could potentially be used to cure genetic disorders such as hemophilia and sickle cell anemia. One popular and widely used DNA-editing research tool that could lead to safe and effective cures for genetic disorders is the CRISPR-Cas9 system. CRISPR-Cas9 stands for Clustered Regularly Interspaced...
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RNA Splicing01:32

RNA Splicing

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Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
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CRISPR and crRNAs02:53

CRISPR and crRNAs

17.1K
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
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Alternative RNA Splicing02:18

Alternative RNA Splicing

21.3K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
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Related Experiment Video

Updated: Jul 17, 2025

CRISPR Epigenome Editing in Human Cells using Plasmid DNA Transfection and mRNA Nucleofection Delivery
07:49

CRISPR Epigenome Editing in Human Cells using Plasmid DNA Transfection and mRNA Nucleofection Delivery

Published on: May 30, 2025

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Programmable multi-kilobase RNA editing using CRISPR-mediated trans-splicing.

Jacob Borrajo1,2, Kamyab Javanmardi1, James Griffin1

  • 1Amber Bio, Inc., South San Francisco, CA 94080.

Biorxiv : the Preprint Server for Biology
|August 30, 2023
PubMed
Summary
This summary is machine-generated.

Splice Editing offers a novel method for precise gene correction in RNA, avoiding permanent DNA changes. This platform enables large-scale transcript editing for diverse genetic diseases.

Keywords:
Cas13RNA-editingSplice Editingexon replacementmulti-kb editingsplicing

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Selection-dependent and Independent Generation of CRISPR/Cas9-mediated Gene Knockouts in Mammalian Cells
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Selection-dependent and Independent Generation of CRISPR/Cas9-mediated Gene Knockouts in Mammalian Cells

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Enhanced Genome Editing with Cas9 Ribonucleoprotein in Diverse Cells and Organisms
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Last Updated: Jul 17, 2025

CRISPR Epigenome Editing in Human Cells using Plasmid DNA Transfection and mRNA Nucleofection Delivery
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Selection-dependent and Independent Generation of CRISPR/Cas9-mediated Gene Knockouts in Mammalian Cells
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Enhanced Genome Editing with Cas9 Ribonucleoprotein in Diverse Cells and Organisms
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Enhanced Genome Editing with Cas9 Ribonucleoprotein in Diverse Cells and Organisms

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Area of Science:

  • Molecular Biology
  • Genetic Engineering
  • RNA Therapeutics

Background:

  • Current gene editing technologies in eukaryotic cells are restricted to minor DNA alterations, often causing permanent, unintended genetic modifications.
  • Delivering large DNA payloads for gene correction presents significant challenges, limiting therapeutic applications.

Approach:

  • We introduce Splice Editing, a versatile platform for *in situ* gene transcript correction.
  • This method utilizes CRISPR-mediated RNA targeting combined with the cell's natural RNA-splicing machinery to insert or replace large RNA segments.
  • The process achieves precise, large-scale RNA editing without inducing DNA cleavage or mutagenesis.

Key Points:

  • Splice Editing enables efficient and specific correction of targeted RNA and protein products, confirmed by RNA sequencing and protein analysis.
  • Novel miniature RNA-targeting CRISPR-Cas systems were discovered and characterized for effective delivery to human cells.
  • This technology facilitates various editing types across multiple targets and cell lines, editing thousands of bases in a single, reversible step.

Conclusions:

  • Splice Editing expands therapeutic possibilities for monogenic diseases with extensive allelic diversity.
  • It offers a reversible, *in situ* RNA editing solution, mitigating the risks of permanent unintended effects associated with DNA editing.