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Introduction to Mechanisms of Enzyme Catalysis01:13

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For many years, scientists thought that enzyme-substrate binding took place in a simple "lock-and-key" fashion. This model stated that the enzyme and substrate fit together perfectly in one instantaneous step. However, current research supports a more refined view scientists call induced fit. The induced-fit model expands upon the lock-and-key model by describing a more dynamic interaction between enzyme and substrate. As the enzyme and substrate come together, their interaction causes...
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Enzymes speed up reactions by lowering the activation energy of the reactants. The speed at which the enzyme turns reactants into products is called the rate of reaction. Several factors impact the rate of reaction, including the number of available reactants. Enzyme kinetics is the study of how an enzyme changes the rate of a reaction.
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The size of the unit cell and the arrangement of atoms in a crystal may be determined from measurements of the diffraction of X-rays by the crystal, termed X-ray crystallography.
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Changes in an Enzyme Ensemble During Catalysis Observed by High Resolution XFEL Crystallography.

Nathan Smith1, Medhanjali Dasgupta1, David C Wych2,3

  • 1Department of Biochemistry and Redox Biology Center, University of Nebraska-Lincoln, Lincoln, NE, 68588.

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Summary

Enzymes utilize diverse structures for catalysis. Time-resolved crystallography revealed how isocyanide hydratase (ICH) conformational changes, driven by residue ionization, enable efficient catalytic intermediate hydrolysis.

Area of Science:

  • Biochemistry
Keywords:
enzyme dynamicsisonitrileserial crystallographyx-ray free electron laser

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  • Structural Biology
  • Enzymology
  • Background:

    • Enzymes exist as conformational ensembles impacting catalytic efficiency.
    • Characterizing these dynamic states is experimentally challenging.

    Conclusions:

    • Isocyanide hydratase (ICH) demonstrates tight coupling between ionization and protein motion.
    • Electrostatic control of enzyme dynamics is a key catalytic mechanism.