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Optical Coherence Tomography: Imaging Mouse Retinal Ganglion Cells In Vivo
Published on: September 22, 2017
Understanding and interpreting CNN's decision in optical coherence tomography-based AMD detection.
S M Azoad Ahnaf1, Sajib Saha2, Shaun Frost2
1Computational Color and Spectral Image Analysis Lab, Computer Science and Engineering Discipline, Khulna University, Khulna 9208, Bangladesh.
This study reveals that the Outer Nuclear Layer to Inner Segment Myeloid (ONL-ISM) is crucial for detecting age-related macular degeneration (AMD) using convolutional neural networks (CNNs). Further analysis highlights the Nerve Fiber Layer to Inner Plexiform Layer (NFL-IPL) as also significant.
Area of Science:
- Ophthalmology
- Artificial Intelligence
- Medical Imaging
Background:
- Automated assessment of age-related macular degeneration (AMD) using optical coherence tomography (OCT) is a growing research area.
- Existing convolutional neural network (CNN) methods for AMD detection lack interpretability.
- This study addresses the need for understanding CNN decision-making processes in AMD diagnosis.
Purpose of the Study:
- To investigate the decision-making processes of CNNs used for AMD detection.
- To identify specific retinal layers influencing CNN predictions.
- To bridge the gap in interpreting CNNs' diagnostic decisions in OCT scans.
Main Methods:
- Trained multiple CNN models (VGG16, VGG19, Xception, ResNet50, InceptionResNetV2) for AMD detection.
- Applied CNN visualization techniques (Grad-CAM, Grad-CAM++, Score CAM, Faster Score CAM) to identify regions of interest.
- Developed retinal layer segmentation to correlate CNN focus with retinal structures using 2130 SD-OCT scans.
Main Results:
- The Outer Nuclear Layer to Inner Segment Myeloid (ONL-ISM) significantly influences AMD detection decisions across all tested CNN models.
- Normalized Intersection (NI) scores indicated varying degrees of ONL-ISM influence for AMD versus normal cases.
- Specific NI scores were reported for each CNN model, demonstrating differential contributions of ONL-ISM.
Conclusions:
- The ONL-ISM is the primary retinal layer contributing to CNN-based AMD detection.
- The Nerve Fiber Layer to Inner Plexiform Layer (NFL-IPL) is identified as the second most influential layer.
- This research provides critical insights into the interpretability of CNNs for AMD diagnosis.
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