A hydrophilic polyimidazolium antibiotic targeting the membranes of Gram-negative bacteria

Yahua Chen1, Melvin Yong1, Ming Li1

  • 1Infectious Diseases Translational Research Programme, Department of Biochemistry, National University of Singapore, Singapore, Singapore.

Abstract

Insights

Polyimidazolium (PIM5) effectively targets multidrug-resistant Gram-negative bacteria (GNB), including strains resistant to last-resort antibiotics. This novel compound rapidly kills bacteria by disrupting membranes and DNA, with minimal human cell toxicity.

Area of Science:

  • Microbiology
  • Infectious Diseases
  • Drug Discovery

Background:

  • Multidrug-resistant Gram-negative bacteria (GNB) pose a significant global health threat, necessitating the development of novel antimicrobial agents.
  • Polyimidazolium (PIM) compounds have demonstrated antimicrobial activity and low cytotoxicity, but their mechanism of action requires elucidation.
  • The emergence of resistance to carbapenems and colistin in GNB highlights the urgent need for alternative therapeutic strategies.

Purpose of the Study:

  • To investigate the efficacy of a hydrophilic polyimidazolium compound, PIM5, against clinical isolates of colistin- and meropenem-resistant Gram-negative bacteria.
  • To elucidate the mechanism of action of PIM5, including its effects on bacterial membranes and DNA.
  • To assess the potential for resistance development to PIM5 and its cytotoxicity to human cells.

Main Methods:

  • Minimum inhibitory concentration (MIC) and time-kill assays were conducted on drug-resistant Escherichia coli and Klebsiella pneumoniae clinical isolates.
  • Membrane permeabilization was assessed using N-phenyl-1-naphthylamine and propidium iodide dyes.
  • Spontaneous and single deletion mutants were generated to investigate resistance mechanisms, with a focus on the BaeS two-component system.

Main Results:

  • PIM5 demonstrated potent activity against both susceptible and resistant GNB strains, including those resistant to colistin and meropenem.
  • The compound exhibited rapid, growth-phase-independent bactericidal effects, particularly in aqueous environments, by disrupting both outer and cytoplasmic bacterial membranes.
  • PIM5 was found to bind and intercalate into bacterial genomic DNA post-cellular entry, and high-level resistance did not readily develop. Mutations in BaeS moderately affected susceptibility and uptake.
  • Negligible cytotoxicity was observed in human cells at bactericidal concentrations, comparable to polymyxin B and colistin.

Conclusions:

  • PIM5 is a highly effective broad-spectrum antibiotic candidate against multidrug-resistant Gram-negative bacteria.
  • Its mechanism involves dual membrane disruption and DNA intercalation, offering a promising alternative to last-resort antibiotics.
  • PIM5 exhibits a favorable safety profile with low mammalian cell toxicity.

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