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Transformation of PET raw data into images for event classification using convolutional neural networks.
Paweł Konieczka1, Lech Raczyński1, Wojciech Wiślicki1
1Department of Complex Systems, National Centre for Nuclear Research, 05-400 Świerk, Poland.
Mathematical Biosciences and Engineering : MBE
|September 7, 2023
Summary
This study transforms tabular positron emission tomography (PET) data into matrices for convolutional neural network (CNN) analysis. This novel feature engineering approach enhances classification accuracy for PET imaging data.
Area of Science:
- Medical Imaging
- Machine Learning
- Nuclear Medicine
Background:
- Convolutional neural networks (CNNs) are used for pattern recognition in positron emission tomography (PET) imaging.
- Unprocessed PET coincidence data are typically in tabular format, posing challenges for direct CNN application.
- Existing methods require pre-processed PET data, limiting direct analysis of raw coincidence events.
Purpose of the Study:
- To develop a method for transforming tabular PET coincidence data into n-dimensional matrices.
- To prepare tabular PET data for classification using CNNs.
- To evaluate the performance of this data transformation method in classifying simulated PET events.
Main Methods:
- Developed a nonlinear transformation to convert tabular PET coincidence data into n-dimensional matrices.
- Utilized principal component analysis (PCA) for feature extraction and image creation from the transformed data.
- Applied the methodology to classify simulated PET coincidence events from NEMA IEC and XCAT phantoms using various neural network architectures (MLP, CNN).
Main Results:
- The developed method increased the number of features from 6 to 209.
- Achieved the highest precision (79.8%) among tested neural network architectures.
- Demonstrated minimal performance degradation when tested on data from a different phantom.
Conclusions:
- The proposed data transformation and feature engineering method effectively prepares tabular PET data for CNN-based classification.
- This approach enhances the utility of raw PET coincidence data for machine learning applications.
- The method shows robustness and improved classification precision in PET imaging analysis.

