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Purification of High Molecular Weight Genomic DNA from Powdery Mildew for Long-Read Sequencing
Published on: March 31, 2017
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The First Genome-Wide Mildew Locus O Genes Characterization in the Lamiaceae Plant Family
Andolfo Giuseppe1, Ercolano Maria Raffaella1
1Department of Agricultural Sciences, University of Naples "Federico II", Via Università 100, Portici, 80055 Naples, Italy.
International Journal of Molecular Sciences
|September 9, 2023
Summary
This study characterized Mildew Locus O (MLO) genes in 11 Lamiaceae species to understand powdery mildew (PM) resistance. Researchers identified 324 MLO proteins and 74 PM susceptibility genes, providing insights for crop breeding.
Area of Science:
- Plant Pathology
- Genomics
- Molecular Biology
Background:
- Powdery mildew (PM) causes significant crop losses, particularly in Lamiaceae species.
- mlo-resistance, a form of PM resistance, is linked to the inactivation of specific Mildew Locus O (MLO) genes.
Purpose of the Study:
- To perform a genome-wide characterization of the MLO gene family in 11 Lamiaceae species.
- To identify potential MLO genes for use in crop breeding programs aimed at enhancing PM resistance.
Main Methods:
- Genome-wide characterization of MLO gene family in 11 Lamiaceae species.
- Phylogenetic analysis using maximum likelihood and motif pattern reconstruction.
- Codon-based evolutionary analysis to assess selection pressures.
Main Results:
- A catalog of 324 MLO proteins was curated across the 11 Lamiaceae species.
- Seven distinct MLO clades were identified, originating from an ancestral domain pattern with 18 conserved motifs.
- 74 putative PM susceptibility genes were located within clade V, with evidence of purifying selection and some diversifying selection in candidate genes.
Conclusions:
- The genomic characterization of Lamiaceae MLO genes provides a foundation for understanding PM susceptibility.
- Identification of candidate susceptibility genes offers targets for future research into PM resistance strategies, such as gene silencing or loss-of-function mutations.

