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Updated: Jul 15, 2025

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Flow Cytometric Analysis for Identification of the Innate and Adaptive Immune Cells of Murine Lung
Published on: November 16, 2021
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Functional Phenotyping of Lung Mouse CD4+ T Cells Using Multiparametric Flow Cytometry Analysis
Céline M Maquet1, Laurent Gillet1, Bénédicte D Machiels1
1Laboratory of Immunology and Vaccinology, Faculty of Veterinary Medicine, FARAH, University of Liège, Liège, Belgium.
Bio-Protocol
|September 27, 2023
Summary
This study details a new flow cytometry method to analyze CD4+ T cell functions in the lungs after viral infection. The technique helps understand immune responses and prevent lung damage caused by viruses like Epstein-Barr virus (EBV).
Area of Science:
- Immunology
- Virology
- Cellular Biology
Background:
- Gammaherpesviruses, including Epstein-Barr virus (EBV), significantly influence host immune responses.
- Ly6Chi monocytes play a role in modulating effector CD4+ T cell function during viral infections.
- Murid gammaherpesvirus 4 infection in mice serves as a model for human EBV infection.
Purpose of the Study:
- To develop and validate an intracellular staining workflow for multiparametric flow cytometry.
- To analyze the polyfunctional properties of CD4+ T cell subsets, including cytotoxic and regulatory functions.
- To investigate the functional heterogeneity of lung CD4+ T cells following viral infection.
Main Methods:
- Preparation of single-cell suspensions from mouse lungs post-infection.
- Ex vivo culture of lung cells with protein transport inhibitors and specific stimulation media.
- Multicolor surface and intracellular staining for cytokines and cytotoxic mediators, followed by flow cytometry analysis.
Main Results:
- A high-resolution method was established to profile functional properties of lung-infiltrating CD4+ T cells.
- The workflow enables simultaneous quantification of cytotoxic mediators and pro- or anti-inflammatory cytokines.
- Deciphered functional heterogeneity of CD4+ T cells recruited to the lungs after viral challenge.
Conclusions:
- The developed flow cytometry protocol provides a detailed understanding of CD4+ T cell responses during viral infections.
- This analysis enhances comprehension of CD4+ T cell regulation's importance in preventing virus-induced lung immunopathology.
- The study offers a comprehensive approach for analyzing immune cell function at the single-cell level.

