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GMP Synthetase: Allostery, Structure, and Function.

Lionel Ballut1, Sébastien Violot1, Sanjeev Kumar2

  • 1Molecular Microbiology and Structural Biochemistry, CNRS, University of Lyon1, UMR5086, 7 Passage du Vercors, CEDEX 07, F-69367 Lyon, France.

Biomolecules
|September 28, 2023
PubMed
Summary
This summary is machine-generated.

Glutamine amidotransferases (GATs) are enzymes with two catalytic sites. This review details the molecular basis of catalysis in GMP synthetase (GMPS), a GAT crucial for guanosine monophosphate synthesis.

Keywords:
ATP pyrophosphataseGMP synthetaseallosteryammonia channelingcrystal structuredrug targetglutaminaseglutamine amidotransferasesuccinimide

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Area of Science:

  • Biochemistry
  • Enzymology
  • Structural Biology

Background:

  • Glutamine amidotransferases (GATs) catalyze glutamine hydrolysis and ammonia transfer.
  • These enzymes possess two distinct catalytic sites linked by an ammonia channel.
  • GMP synthetase (GMPS) is a GAT essential for the de novo guanosine monophosphate synthesis pathway.

Purpose of the Study:

  • To provide a comprehensive assessment of the molecular basis of catalysis in GMP synthetase (GMPS).
  • To review the current understanding of GMPS biochemical function, particularly its acceptor domain catalysis and inter-domain communication.
  • To highlight advancements in understanding GMPS structure-function relationships, especially following the determination of a glutamine-bound mutant structure.

Main Methods:

  • Review of existing literature and crystal structures of GATs and GMPS.
  • Analysis of structural data to elucidate ammonia channeling and conformational changes.
  • Integration of biochemical and structural information to understand enzyme catalysis.

Main Results:

  • While ammonia channels are evident in most GAT structures, GMPS catalysis understanding lagged until specific mutant structures were resolved.
  • Structural insights reveal conformational changes critical for coordinating dual catalytic activities.
  • The review synthesizes current knowledge on GMPS's molecular mechanisms.

Conclusions:

  • Understanding GMPS catalysis has significantly advanced through structural biology, particularly studies of mutants.
  • The enzyme's dual catalytic sites and ammonia channeling are key to its function.
  • This review consolidates current knowledge, offering insights into this important enzyme's biochemical function.