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Selective thiazoline peptide cyclisation compatible with mRNA display and efficient synthesis.

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A new amino acid, meta-cyanopyridylalanine (mCNP), enables genetically encoded peptide macrocyclization during discovery. This method enhances peptide stability and allows for the creation of novel macrocyclic and bicyclic peptides for therapeutic applications.

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Area of Science:

  • Biochemistry
  • Molecular Biology
  • Medicinal Chemistry

Background:

  • Linear peptides often lack stability in biological systems, limiting their therapeutic potential.
  • Macrocyclization improves peptide affinity, selectivity, stability, and cell permeability.
  • Genetically encoding macrocyclization during peptide discovery is advantageous over post-discovery methods.

Purpose of the Study:

  • To introduce a novel method for genetically encoding macrocyclization in peptides using meta-cyanopyridylalanine (mCNP).
  • To demonstrate the utility of mCNP for creating stable macrocyclic and bicyclic peptides.
  • To explore the application of this technology in discovering bioactive peptide sequences.

Main Methods:

  • Ribosomal incorporation of mCNP into peptides during translation.
  • Spontaneous macrocyclization via reaction between mCNP and N-terminal cysteine.
  • Incorporation of mCNP during Fmoc solid-phase peptide synthesis.
  • Discovery of macrocyclic peptides targeting influenza haemagglutinin.
  • Molecular dynamics simulations to analyze structural stabilization.
  • Compatibility studies with thioether macrocyclization for bicyclic peptide formation.

Main Results:

  • mCNP is successfully incorporated into peptides and spontaneously forms macrocycles with N-terminal cysteine.
  • The mCNP cross-link stabilizes beta-sheet structures in bioactive macrocyclic peptides.
  • The method allows for controlled formation of bicyclic peptides through sequential macrocyclizations.
  • mCNP incorporation is compatible with standard peptide synthesis techniques.

Conclusions:

  • mCNP provides a versatile and genetically encoded approach for peptide macrocyclization.
  • This technology enhances peptide stability and structural rigidity, improving their drug-like properties.
  • The method facilitates the discovery and development of novel macrocyclic and bicyclic peptide therapeutics.