Major data analysis errors invalidate cancer microbiome findings
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Updated: Jul 14, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Abraham Gihawi1, Yuchen Ge2,3, Jennifer Lu2,3
1Norwich Medical School, University of East Anglia , Norwich, United Kingdom.
Importance:
Recent reports showing that human cancers have a distinctive microbiome have led to a flurry of papers describing microbial signatures of different cancer types. Many of these reports are based on flawed data that, upon re-analysis, completely overturns the original findings. The re-analysis conducted here shows that most of the microbes originally reported as associated with cancer were not present at all in the samples. The original report of a cancer microbiome and more than a dozen follow-up studies are, therefore, likely to be invalid.
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